Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Msed_1074 |
Symbol | |
ID | 5104455 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Metallosphaera sedula DSM 5348 |
Kingdom | Archaea |
Replicon accession | NC_009440 |
Strand | - |
Start bp | 1003021 |
End bp | 1003494 |
Gene Length | 474 bp |
Protein Length | 157 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 640506969 |
Product | carotene hydroxylase |
Protein accession | YP_001191162 |
Protein GI | 146303846 |
COG category | |
COG ID | |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATTATGG AAAATATTCT AGAGTATGCG GGCGTTTTCC TCGCCACGTT TGTGGGAATG GAGTTCGTGG CCAGGGGAAT GCACAAATAC GTGATGCACG GGTTTATGTG GTCGGTCCAC CAGGATCATC ACAGGGAGAG GCAGGCAGAG ATAGAGAAGA ACGATCTGTT CGGGCTCTTG TTTGCAGGAG TTGCGATTCT CCTGATCTTC CAGGGTATTC TTCACGGGAA CCTTCTAGCA CTAAGTGCAG GATTAGGTTT AACAGGTTAT GGGGTGGCCT ACTTCTTCGT GCATGACATG ATCATTCATG ATAGGCATCT TCACCTCAGG AGTTGGGGAA CGAGGCACAG TCCCTTCAGG GAATTAATCC TGGTTCACGA GGTTCACCAC GCCGAGGGCG AGGGGAATTG GGGCTTCCTG TTCGTGATAA GGGGTCTTGA TAAGATACCT CCAGAGATTC AGGTGAAGAA GTGA
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Protein sequence | MIMENILEYA GVFLATFVGM EFVARGMHKY VMHGFMWSVH QDHHRERQAE IEKNDLFGLL FAGVAILLIF QGILHGNLLA LSAGLGLTGY GVAYFFVHDM IIHDRHLHLR SWGTRHSPFR ELILVHEVHH AEGEGNWGFL FVIRGLDKIP PEIQVKK
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