Gene Msed_1074 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMsed_1074 
Symbol 
ID5104455 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMetallosphaera sedula DSM 5348 
KingdomArchaea 
Replicon accessionNC_009440 
Strand
Start bp1003021 
End bp1003494 
Gene Length474 bp 
Protein Length157 aa 
Translation table11 
GC content50% 
IMG OID640506969 
Productcarotene hydroxylase 
Protein accessionYP_001191162 
Protein GI146303846 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTATGG AAAATATTCT AGAGTATGCG GGCGTTTTCC TCGCCACGTT TGTGGGAATG 
GAGTTCGTGG CCAGGGGAAT GCACAAATAC GTGATGCACG GGTTTATGTG GTCGGTCCAC
CAGGATCATC ACAGGGAGAG GCAGGCAGAG ATAGAGAAGA ACGATCTGTT CGGGCTCTTG
TTTGCAGGAG TTGCGATTCT CCTGATCTTC CAGGGTATTC TTCACGGGAA CCTTCTAGCA
CTAAGTGCAG GATTAGGTTT AACAGGTTAT GGGGTGGCCT ACTTCTTCGT GCATGACATG
ATCATTCATG ATAGGCATCT TCACCTCAGG AGTTGGGGAA CGAGGCACAG TCCCTTCAGG
GAATTAATCC TGGTTCACGA GGTTCACCAC GCCGAGGGCG AGGGGAATTG GGGCTTCCTG
TTCGTGATAA GGGGTCTTGA TAAGATACCT CCAGAGATTC AGGTGAAGAA GTGA
 
Protein sequence
MIMENILEYA GVFLATFVGM EFVARGMHKY VMHGFMWSVH QDHHRERQAE IEKNDLFGLL 
FAGVAILLIF QGILHGNLLA LSAGLGLTGY GVAYFFVHDM IIHDRHLHLR SWGTRHSPFR
ELILVHEVHH AEGEGNWGFL FVIRGLDKIP PEIQVKK