| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_1054 |
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| Symbol | |
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| ID | 5104436 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Metallosphaera sedula DSM 5348 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009440 |
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| Strand | - |
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| Start bp | 982416 |
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| End bp | 983684 |
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| Gene Length | 1269 bp |
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| Protein Length | 422 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640506950 |
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| Product | malate dehydrogenase |
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| Protein accession | YP_001191143 |
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| Protein GI | 146303827 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0281] Malic enzyme |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.767504 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACCTG TAGAGATATC CCTCAAGTAC CAGGGAAAGA TTGAGGTGAT GCCCAAGGTT
CCCATCTCCA GTTACGACGA CTTCTCGGTG ATATATACCC CTGGAGTTGC TGAGGTAGTC
AAGGAGATTT CTAAGGACAA GGACAAGAGT TTCCAATTAA CAAGTAGGTG GAATAACGTA
GCTATTATCA CGGATGGTAC CAGGGTTTTG GGTCTAGGTA ACGTTGGCCC AGAGGCATCT
CTTCCCGTGA TGGAGGGAAA GGCACTTCTC TTCAAGTACC TGGGAGGCGT AGACGCTATT
CCCTTGCCTC TGGCTGTGAG GGATCCTGAC ACCATCATAA ACGTAGTTTC TGCTCTAGAA
CCGTCTTTCG GTGGAATAAA CCTGGAGGAC GTAGAGAGTC CCAAGTGTTT CTACATCCTT
GAAAAACTTC AGGAAAGGAT GAACATCCCA GTGTGGCATG ACGATCAACA GGGAACCGCT
GGAGCTGTAC TTGCTGCCCT CATAAACGCC ATGAAAGTCG CAGGAAAGGG ACTGGACAGC
AAGATAGTGA TATTTGGAGC CGGTGCAGCT AACATTGCTA CCGTGAGACT CCTCAAGGCA
TATGGTTTCG ACCCCAAGAG GATGATAGTG GTTGATAGGG AAGGCGTGCT TCACGCTGAG
AGGAGGGATC TGGACGCAAT GATGTTCAGT CATAAATGGA AGTATGAAAT TGCGGTCACG
ACTAACGGGT TCAACATTAC CACGTTGGAT GAGGCATTCA AGGGAGCAGA TATTCTAATT
GCTGCCTCTA TGCCAGGTCC GAACACCATT CCTAAGAGAT GGATTAGCCT CATGAAGGAC
CCCATTGTCT TTGCCTTGGC CAATCCCGTC CCTGAGATCT ATCCTTCGGA CGCGATAGAC
GCCGGAGCCA AGGTGGTGGC CACGGGCAGA AGCGACTTCC CTAACCAGGT GAACAACTCG
CTCATTTTCC CTGGGGTTTT CAGGGGAGTC CTGGACAGTA GGTCCTCCAA GGTTGATGAT
GCCATGGTCA TAGCGGGAGC GGAGGCCTTA GCGAGATTCG CCGAGAGGAA GGGTATATCG
CCCACCTACA TTATCCCCAG GATGGATGAA TGGGACGCCT ATTACGAGTT GGCCTCTGCA
GTTGCGGAAA AGGCGGTGGA AAGGGGATAC GCCAGGGTAA GGCTAAGTAG GGAGGAGTTT
AGACTGATGG CCAAAACTAA GATAGAGCAG ACCAGGAATA AGATAAGGGC GATCCAGAAT
GTTGATTAG
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| Protein sequence | MKPVEISLKY QGKIEVMPKV PISSYDDFSV IYTPGVAEVV KEISKDKDKS FQLTSRWNNV
AIITDGTRVL GLGNVGPEAS LPVMEGKALL FKYLGGVDAI PLPLAVRDPD TIINVVSALE
PSFGGINLED VESPKCFYIL EKLQERMNIP VWHDDQQGTA GAVLAALINA MKVAGKGLDS
KIVIFGAGAA NIATVRLLKA YGFDPKRMIV VDREGVLHAE RRDLDAMMFS HKWKYEIAVT
TNGFNITTLD EAFKGADILI AASMPGPNTI PKRWISLMKD PIVFALANPV PEIYPSDAID
AGAKVVATGR SDFPNQVNNS LIFPGVFRGV LDSRSSKVDD AMVIAGAEAL ARFAERKGIS
PTYIIPRMDE WDAYYELASA VAEKAVERGY ARVRLSREEF RLMAKTKIEQ TRNKIRAIQN
VD
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