Gene Msed_1053 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMsed_1053 
Symbol 
ID5104435 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMetallosphaera sedula DSM 5348 
KingdomArchaea 
Replicon accessionNC_009440 
Strand
Start bp981965 
End bp982426 
Gene Length462 bp 
Protein Length153 aa 
Translation table11 
GC content48% 
IMG OID640506949 
ProductGCN5-related N-acetyltransferase 
Protein accessionYP_001191142 
Protein GI146303826 
COG category[R] General function prediction only 
COG ID[COG3153] Predicted acetyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.246804 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTGATTA GGAAAGCTGA ACCCAAGGAC ATTGACAGCG TTGCTGACAT GTTCGAGCGA 
ATGTACACCC TGAACTCAGA GTTTGACCCA CTCCTTCAAG TCCACGATGA GATCAGTGAG
AGATTGAAGA GGAGCCTTGT CGAGGACCTG AAGAGTGAGG ATAGTCTCGT GGCCGTAGCA
GAGGATGGAG GGAAAGTAAT AGGGGCTGTG AGGGTCAGGC TAGAGAGAAG GGAATACTAC
ATTCCAGAGA AGATGGCAGT CATAGAGGAG ATATACGTGA TGCCTGGATA CAGGAGGGAA
GGGGTAGGTG AGAAACTGGT GGACTTCGTG ATATCAGAGC TATCCAAGAA AGGTGCGAGA
TCCATAATGG CTAGATTCCC CGCAAAGAAC ATCATTGCCG AGTCCTTCTA CAGGAAGCGA
GGTTTCAGGG AGATACACTA CGAGTTCATA AAGAGGATAT AA
 
Protein sequence
MLIRKAEPKD IDSVADMFER MYTLNSEFDP LLQVHDEISE RLKRSLVEDL KSEDSLVAVA 
EDGGKVIGAV RVRLERREYY IPEKMAVIEE IYVMPGYRRE GVGEKLVDFV ISELSKKGAR
SIMARFPAKN IIAESFYRKR GFREIHYEFI KRI