| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_1045 |
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| Symbol | |
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| ID | 5104427 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Metallosphaera sedula DSM 5348 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009440 |
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| Strand | - |
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| Start bp | 972383 |
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| End bp | 972766 |
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| Gene Length | 384 bp |
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| Protein Length | 127 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640506941 |
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| Product | HEPN domain-containing protein |
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| Protein accession | YP_001191134 |
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| Protein GI | 146303818 |
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| COG category | [S] Function unknown |
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| COG ID | [COG2250] Uncharacterized conserved protein related to C-terminal domain of eukaryotic chaperone, SACSIN |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 36 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCCTAGCA GAACTAGTGA TTGGTTAAGA CAAGCTGAGA GGAATCTTAA ATCGGCCGAG
GTTAACTATC AGCACGGACT CTATGAGGAG TCCTGCTATG AGTCGCAACA ATGCGCGGAG
AAAGCTGTCA AGGGCCTCCT AGCCCATCTA CACAGGGAGG AAAGGGGTCA CTCCATAACA
CTCCTATTAC GAGCTGTCAC TTTAGAGGTT CCCAGTGAAG TTCTGGAATG TGCCCAAGAA
TTGGACAAAC ATTATATTCC GTCACGTTAT CCAGATGCTT ACGACGAGGG AGGACCTCTG
GATTATTACA ATAGGGGAGA TGCGGAGCGT TGTATGGAAT GTGCCAGAAG AGTTCTAAAC
TGGGTGAAGG GACGTGTGGT GTGA
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| Protein sequence | MPSRTSDWLR QAERNLKSAE VNYQHGLYEE SCYESQQCAE KAVKGLLAHL HREERGHSIT
LLLRAVTLEV PSEVLECAQE LDKHYIPSRY PDAYDEGGPL DYYNRGDAER CMECARRVLN
WVKGRVV
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