| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_0999 |
|---|
| Symbol | |
|---|
| ID | 5105598 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Metallosphaera sedula DSM 5348 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009440 |
|---|
| Strand | + |
|---|
| Start bp | 921612 |
|---|
| End bp | 921956 |
|---|
| Gene Length | 345 bp |
|---|
| Protein Length | 114 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 640506898 |
|---|
| Product | DNA polymerase beta subunit |
|---|
| Protein accession | YP_001191091 |
|---|
| Protein GI | 146303775 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.0343888 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 6 |
|---|
| Fosmid unclonability p-value | 0.00940331 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGTCAAGCT GGGTAAGGGA TAAGTTTGAG CACCTTTCCA AGTGGAGGGA GTATGCCAAG
GCCATAGCGG ATTCGGCAAG GGAGTTTGAT CCTGGGGTGA AGGTTTACGT TTTCGGGGGA
GTGGCAGAGG ATAGGATAAC CGTGTTAAGC GATATAGATA TACTTATCAT TTTTCCTAGA
CTATTAAGTG ACAGGGACAT AATCAGGTTA AGGAGAGAAA TACTTGTAAG GGCTATGGAT
GAGCACTCTC CTCCCTTTGA CTCTCCGGTG GAGCTACACG TAGTTGACTC TGAAAGGGCA
AAGGAGTATC TCGGTCGTGC AAGGAAGTTG ATTGAGATAA CGTAG
|
|---|
| Protein sequence | MSSWVRDKFE HLSKWREYAK AIADSAREFD PGVKVYVFGG VAEDRITVLS DIDILIIFPR
LLSDRDIIRL RREILVRAMD EHSPPFDSPV ELHVVDSERA KEYLGRARKL IEIT
|
|---|
| |