| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_0964 |
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| Symbol | |
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| ID | 5104516 |
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| Type | |
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| Is gene spliced | No |
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| Is pseudo gene | Yes |
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| Organism name | Metallosphaera sedula DSM 5348 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009440 |
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| Strand | + |
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| Start bp | 891172 |
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| End bp | 892309 |
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| Gene Length | 1138 bp |
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| Protein Length | |
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| Translation table | |
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| GC content | 54% |
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| IMG OID | 640725398 |
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| Product | |
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| Protein accession | |
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| Protein GI | |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0675] Transposase and inactivated derivatives |
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| TIGRFAM ID | [TIGR01766] transposase, IS605 OrfB family, central region |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.000000382138 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.366665 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCACGGG CTCGAGAGCG AGCCACCCGC GAGGGTAGTT CCATCACGGA GATGACCTTA
ACGCTTAGGA TGAAGCTCAG CTCCGCGGCC CTCGGGCCTG TGGCTGATCG TTATATGGGG
GCAAAGAGAC GTTCTTCAAT GGATCCACGA GAATAAGAAG ACGTTCTTGA AGGACGTCCA
CCGTGGAGTG TACAGGGCAA TAAGGGAGAA GTTTCAGTTG CCTTCGAAGC TTGCGCAGAA
CTGCTATCGC GACGCGATCT CCCTTTACAA GGGATGGGAG AGGAACCGAG GACAGGGAGA
TTCCCCGTGA TGCAAAGCGT GTTGCTGTGG TTGACTCGAG GGGCTAGTTA CGACGTCGAT
TTCGAGAAGA TGACCGCGAT GGTTCTAAGA CATGAGGTCA AGGTAGTCGG GTAAAGGAAC
TTATGCGAGT ACAGGGACTT CAAGGTGAGG GAGGCCAGGC TCGTGAAGAG ACACGAGTGG
TACCTCAACG TAGTGATGAA GAGGTAGATT CAAAACACGC AAGCCAAAGT CGTCGTAGCC
GTGGACTCAA CATGGACTTC ATCACCGTCG GTAACAATGC ACAAGTTGTT GAAATACCCA
CGCGTCTTCA CGAGGCTCTT CACCACAGGA AACTCGTTGG GCGCCTGCAG AGAAACGCGA
GGAGGTGGTG GCAGAACCCG AGGATACTCA ACAGGATCAG GGGTTACCAC ACGAAGGGAA
AGAGAATTCT CACGGACTTC GCCCGAAAGG TCGGGAAGTG GATCGTCGAC GTTGCCGAGA
CGTTAGGCGC GAACTACATC GTCCTTGAGG ACCTCAACAA GATGGTCTGC GCGTGAAGTC
GTTGAAGAGG AGTAGGGACA AGTTGTACCT CATGCAGTAT GCTCGCCTTC AGTACTGGGT
CGAGTAGCAG GCGAGAAAGC GTGGCCTCAA CGTGATTTGC GTGGATCCAG CTCAGTCGTC
CACGACGTGC CCCAGGTGCG GACACGCGAT GAAGGAGACT GGACACCGCA CCCTCAAATG
CCCTCAATGC AGTTTTGAGG TTCATCGTGA TCATGTGGCG GTGTACAAGC TATGTGGGAG
GGGTTCTCTG AGCCTCTCGA CTGCCCCTCA GATGAGAGAT GTAGTCCCGA ATCGATGA
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| Protein sequence | |
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