| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_0959 |
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| Symbol | |
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| ID | 5104511 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Metallosphaera sedula DSM 5348 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009440 |
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| Strand | + |
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| Start bp | 885673 |
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| End bp | 886449 |
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| Gene Length | 777 bp |
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| Protein Length | 258 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640506861 |
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| Product | radical SAM domain-containing protein |
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| Protein accession | YP_001191054 |
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| Protein GI | 146303738 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1533] DNA repair photolyase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.00609549 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATAAAGG AGATAGAGGT GAAAAGTGCT CTCAGTAAGT CCGGTTTAAG GGAACTTGAC
TACTCCCTGA ATCCATACCT TGGATGCAGG TTTTCCTGTA CCTACTGTTA TGCCAGGTAC
TTTTCTCCTA AAGAGGTTGG GGATAGGTGG GGAGAGGTAA TTCTAGTGAA GAAAAACCTT
TTGGAGGTCC TCAGGAAGGA GGTAAAGGTG AAGAGGAAAG GCGTCGTGGG GATCTCCACA
GTAACGGACC CCTACCAACC AGTGGAGAAG GACTTTGAAC TAACTAGGAA ATCCCTGGAA
CTGCTTCTAG AAAACGGTTT CAGGGTTTCC ATACAGACCA AGTCTCCTCT GGTGTTAAGG
GACCTAGACA TACTCACCAG GTATAGGGAA AGAGTTGACG TCGGAATGAC CGTGACTACC
ATGAATCCTG AAGAGGCGAG GCAGGTTGAA CCCTTGGCTC CTCTGCCTCA AGCTAGGATT
GAGACCTTGA AAAGGTTGAA GGAGAGCGGA GTGCAAGTTT GGATGTTCCT AGGTCCTGTT
ATACCTGGAC ACAACTTCTT GGGAGTACTC GAGGAGGCAG GGAAGATCGG GGTTAGGGTG
ATATATGACG TCTTAAACTA TTATCCAGGC CTCCCGTTTA GGCCTGTTCC AAGGAACACG
TGGAAAGTAC TTGAAGACCA GATCAGGAGG AGGTGCGAGG AGCTAAGAGT CCAGTGTCAC
TCGGAGCAAG AAGACTGGAT ATACGAAACA AAAAGAAGAT ATAACACGTT ATTTTAG
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| Protein sequence | MIKEIEVKSA LSKSGLRELD YSLNPYLGCR FSCTYCYARY FSPKEVGDRW GEVILVKKNL
LEVLRKEVKV KRKGVVGIST VTDPYQPVEK DFELTRKSLE LLLENGFRVS IQTKSPLVLR
DLDILTRYRE RVDVGMTVTT MNPEEARQVE PLAPLPQARI ETLKRLKESG VQVWMFLGPV
IPGHNFLGVL EEAGKIGVRV IYDVLNYYPG LPFRPVPRNT WKVLEDQIRR RCEELRVQCH
SEQEDWIYET KRRYNTLF
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