| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_0924 |
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| Symbol | |
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| ID | 5104354 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Metallosphaera sedula DSM 5348 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009440 |
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| Strand | - |
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| Start bp | 854806 |
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| End bp | 855774 |
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| Gene Length | 969 bp |
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| Protein Length | 322 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 640506827 |
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| Product | NADH ubiquinone oxidoreductase, 20 kDa subunit |
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| Protein accession | YP_001191020 |
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| Protein GI | 146303704 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1740] Ni,Fe-hydrogenase I small subunit |
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| TIGRFAM ID | [TIGR00391] hydrogenase (NiFe) small subunit (hydA) |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGAACC TCTTGTGGCT ACAAGGGGGA GCGTGTGGAG GGAATACTCT CTCTGTCCTA
AACGCATCTG ATCCCGATAT ACTATCCTTC CTCTATCAGA ACAATGTGAA ACTTCTCTGG
CATCCGTCGC TCTCACAGGA ATGTGGCAGG GATTTAAAGA AAATATTAGA ATCGATAATC
GAGGGGAAAA TAAATCTAGA TATTCTCCTT TTTGAGGGTT CTATTGTGAG GGGACCTGCA
GGAAAGGGCA CATTTAATAT GTTTGCTGGA AAGCCAATGA TGTGGTGGGT CAGGGAAATT
GCACCCCAAG CAAACTACAT TGTGGCTGTG GGTGACTGCG CCAGCTTTGG TGGAATACCT
GCAGCAGATC CGAATCCAAC CGAATCAACC GGGCTGCAAT TTCACAGAAA GGAGATGAGC
GGTTTCTTAG GAAAGGATTT CAGGTGTAAG TCGGGGCTTC CAGTTATAAA TCTCTCAGGT
TGTCCAGTTC ATCCTGAGTG GCTTATCACT ACCTTGACAC TCATCCTAAG GGGAGAGATG
AATCAAGAAA TGTTAGATGA ATTTAATAGA CCTAGAATAT TTTACGCCAC AACTACTCAA
TTCGGTTGTC CCAGACAACC ATATTTCACT TATAAAATAT CAACTAAGGA ATTTGGACAT
AAAGAAGGAT GTCTGTTCTT CGATCTAGGA TGTAGGGGAT CATACACTAG AAGCTCGTGC
AATAACATTC TCTGGAATAA TCAGAGCAGT AAGACCAGGG TTGGCACACC GTGTATGGGA
TGTACAGAAT TTGATTTTCC AACCTTTAAC TTTTTCAAAA CAGAGAAGAA CAGATCAGGA
ATTCCAAGGA GATTACCCTT GGGTGTTTCC AAGGGGGCAT ATGTAACCTT TGCAGCGATA
GCTCGGGGAG CTGCTCCACA GTTCTTGGAG AGACCACTGA TAAGAAAGAA GGGAGATTGG
ATTGAATGA
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| Protein sequence | MKNLLWLQGG ACGGNTLSVL NASDPDILSF LYQNNVKLLW HPSLSQECGR DLKKILESII
EGKINLDILL FEGSIVRGPA GKGTFNMFAG KPMMWWVREI APQANYIVAV GDCASFGGIP
AADPNPTEST GLQFHRKEMS GFLGKDFRCK SGLPVINLSG CPVHPEWLIT TLTLILRGEM
NQEMLDEFNR PRIFYATTTQ FGCPRQPYFT YKISTKEFGH KEGCLFFDLG CRGSYTRSSC
NNILWNNQSS KTRVGTPCMG CTEFDFPTFN FFKTEKNRSG IPRRLPLGVS KGAYVTFAAI
ARGAAPQFLE RPLIRKKGDW IE
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