| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_0920 |
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| Symbol | |
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| ID | 5104350 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Metallosphaera sedula DSM 5348 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009440 |
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| Strand | + |
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| Start bp | 851372 |
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| End bp | 852511 |
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| Gene Length | 1140 bp |
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| Protein Length | 379 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 640506823 |
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| Product | coenzyme F420-reducing hydrogenase alpha subunit-like protein |
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| Protein accession | YP_001191016 |
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| Protein GI | 146303700 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG3259] Coenzyme F420-reducing hydrogenase, alpha subunit |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTAAATC CATTAGCATT AGATACTATC GATCTAAAGG TGAAAATTAG CGATGGTAAG
GTAGTATATG CCAAGTCATC TGGAAATAAA CTGAGGGGAT ACGAAAGGAT GTTTATCGGT
AAGGATCCGA GGGAACTCCC AGATATTATC CCTAGGGTAC TCTCTACATG CGCGCAGTCC
CATACCTTTG CCTACATCAA GGCTGTGGGA AACAATAACT TGGATCTTAT AGGAAATCTA
ATGGTGAGTC TAGAGATAAT CGAAAGTAAC ATAAAACATC CCTACGCGTA TTGGCTGCCG
TATTTGGGTG GGGTAGAGTA TGAGTTTCCA GGGGGGAAGA AATTCAGGAA GGTATCCCAC
GCAAGCAGAA AAATAAGGGC TATAATGGAG AAAATAGGCG GAAAATGGCC CTCAGTGGAC
TACGTCAAAA AGGGCACTAA GCTATCCTTT ACCAGGGAGG AACTGAAGGA TGTAATAAGT
TTCCTCGAAA GCGACATGCT GGGCATGAGT CTCCAGGACT TCTTGGGTAT TAAAGAGCTA
GAGGAGCTTA GAGGGGATAT TAGATATCTT AATGCGGAGT ACTGGAGAGC CGGTTTAGGA
AGATACGCGT CAGCGTGGGC CCAACTGGAT GTCTCCAAGA TAGATGACCA GGGTGATAGG
GTATTGTATG ACGGGACATT GGTTGAAGTT GGACCGCTGG CACAAGCTCT CACATTTGAC
GACATGATAG TTAAACTACA TAGGGATATG GGACCATCGC CTCTATTGAG GGAATTGGCT
AGAGTTAGGG TAGCAGCTAA ATTGATACTT GGTTTACAGG ATCTAGAAAT TGAGTCCGAA
GGATTGCATA TACGCGGAGA TGGAATTGGA TATCTAGAGT CCATAAGGGG AGTTCTAGTT
CATCAGGTGA AGGTAAAGGA CAAGGTGGTT GAGTACAGAG TGATTCAACC CACAACATTT
AATGCCTCTC CTGGAGGAGC GTTGGAAAAT GCCGTTTTGG GAATTCCGGT TCGTAACTAT
AGAAATCCGT GGGAGATTTC CCTAGCCGTG AGCTCCTTGG ATTCCTGTTT CATTACTAAT
GTTGAGGTTT ATCTGGATGA CAAATACCTA TTTACCAAGA GAGTAGGAGG GTTTTGCTGA
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| Protein sequence | MLNPLALDTI DLKVKISDGK VVYAKSSGNK LRGYERMFIG KDPRELPDII PRVLSTCAQS
HTFAYIKAVG NNNLDLIGNL MVSLEIIESN IKHPYAYWLP YLGGVEYEFP GGKKFRKVSH
ASRKIRAIME KIGGKWPSVD YVKKGTKLSF TREELKDVIS FLESDMLGMS LQDFLGIKEL
EELRGDIRYL NAEYWRAGLG RYASAWAQLD VSKIDDQGDR VLYDGTLVEV GPLAQALTFD
DMIVKLHRDM GPSPLLRELA RVRVAAKLIL GLQDLEIESE GLHIRGDGIG YLESIRGVLV
HQVKVKDKVV EYRVIQPTTF NASPGGALEN AVLGIPVRNY RNPWEISLAV SSLDSCFITN
VEVYLDDKYL FTKRVGGFC
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