| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_0913 |
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| Symbol | |
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| ID | 5103559 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Metallosphaera sedula DSM 5348 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009440 |
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| Strand | + |
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| Start bp | 845396 |
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| End bp | 845824 |
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| Gene Length | 429 bp |
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| Protein Length | 142 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 640506816 |
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| Product | hydrogenase expression/synthesis, HypA |
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| Protein accession | YP_001191009 |
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| Protein GI | 146303693 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0375] Zn finger protein HypA/HybF (possibly regulating hydrogenase expression) |
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| TIGRFAM ID | [TIGR00100] hydrogenase nickel insertion protein HypA |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.533701 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCATGAGT GGTCCATAGC TGATGCTATC TTGCGTACGG TAGAGGATAT GATAGAGGGA
AAGGAGGGAA AAGTCTCCAA AATAGTACTG GGTATTCCTA GCATATCTTT TCTGGACGTG
GAGATATTAA CTGAAGCATT TGATGAACTT AAGAAAAACA CAAGTTTAAG CAACTCTCGG
CTGGAGGTTA AGATAAGGGC GCCAGTTTTT ACATGTCACA GGTGTGGATC TACCTTCTCC
TTAGACGAGA TAAAATCTCA AGTAGACGGC TTGAGGTCTG AATTTGGCGA GGAGTATCCG
CTTCATCTCA TTCCCATGTT AGGCCCTTCG TTCTTAAGAT GCCCCCACTG TGGTTCCCAC
GACATTTCGG GGAACGATGA CATAGTTGTG GAGAGGGTTG AATTTGAACC CACTGTTGAA
CCTAGCTAG
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| Protein sequence | MHEWSIADAI LRTVEDMIEG KEGKVSKIVL GIPSISFLDV EILTEAFDEL KKNTSLSNSR
LEVKIRAPVF TCHRCGSTFS LDEIKSQVDG LRSEFGEEYP LHLIPMLGPS FLRCPHCGSH
DISGNDDIVV ERVEFEPTVE PS
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