Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Msed_0899 |
Symbol | |
ID | 5103545 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Metallosphaera sedula DSM 5348 |
Kingdom | Archaea |
Replicon accession | NC_009440 |
Strand | + |
Start bp | 832384 |
End bp | 832749 |
Gene Length | 366 bp |
Protein Length | 121 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 640506802 |
Product | PilT domain-containing protein |
Protein accession | YP_001190995 |
Protein GI | 146303679 |
COG category | [R] General function prediction only |
COG ID | [COG4113] Predicted nucleic acid-binding protein, contains PIN domain |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCAAGGT ACGTGATTGA TGCAAGCTCG ATCATTGAGG TTGTGATGAG ATTACGCGAG GATGCCATAT CTTTTCTGGA GGAATGCGTC AGCGCGGATC TGGTGCTTTA CGAGATTGGT AACTTCCTTT GGAAGACGCG ATACTCTGAA CTTCTGGAGC CATTTAGACA TGTCCTTGAG TTCATACCGC TGGAGAGCGT TGGGTTGAAC CATGAGGTCC TCAAGATCGC CAATGACGAG AGGTTAACCT ACTATGACGC GGTCTACCTT TACCTCAGTA GGAGGAGAGG ACTTCAGCTA ATAAGTGAAG ACAATGACCT GGTTAGAAGG GGAGCCATAA CGGTTCAACA GGCACTTGGG AAATGA
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Protein sequence | MARYVIDASS IIEVVMRLRE DAISFLEECV SADLVLYEIG NFLWKTRYSE LLEPFRHVLE FIPLESVGLN HEVLKIANDE RLTYYDAVYL YLSRRRGLQL ISEDNDLVRR GAITVQQALG K
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