| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_0795 |
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| Symbol | |
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| ID | 5105118 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Metallosphaera sedula DSM 5348 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009440 |
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| Strand | + |
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| Start bp | 726039 |
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| End bp | 726866 |
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| Gene Length | 828 bp |
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| Protein Length | 275 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 640506700 |
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| Product | Sec-independent protein translocase TatC |
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| Protein accession | YP_001190894 |
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| Protein GI | 146303578 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0805] Sec-independent protein secretion pathway component TatC |
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| TIGRFAM ID | [TIGR00945] Twin arginine targeting (Tat) protein translocase TatC |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.166427 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACGGAAA GAACTAATGA ACTTCCAAAG TCTCAGGAAA GACCCTTACT GGAACATCTT
AATGAGCTTA TTGTTAGGGC TAGAAGGGCA CTAATATCCC TTGTTATAGC CTTCGTCATT
TTCTTCTTTT TCGGGATAAC TGAGGTATCC TTCGACGGCT TCAATTTTCC TATCCTCTAT
CCAAACCTGT TTAACAGCAT CTCGTCACAT TTTATTGAAC TGTTTATCCA CACGGAGCTT
CCGCCTCAAA TGAAGTTGTT AAACCTAAAC CCCTTTGATA CCCTATTCTC AGCTGCCTAT
GTTTCGTTCT TCCTCTCCCT CTTTATAGCC CTTCCGATCA TTGTCCATGA AATATGGGGT
TTCGTGTCTC CGGGACTTTA TGAACATGAG AAGAGAATGG CTAAGATGAT AGTACTGCCT
GCATTTATCC TCTTTGCAGC CGGTTCCAGC TTCGCATACT TTGTGATTAT TCCAGTTATG
ATGAAGTTCG TGCTTATATA TACAACAACC CTCGGAGTGG AACCCACTCT AAGTTTGAGG
GCTTTCATAA ATACTGTTAT GTCACTTATG TTAACGGTGG GGGTGGCGTT TGAATACCCC
CTTGTCATGA GCATGCTTAC TTTGGCTGGA GTAGTGAAGG CACAGAGCTG GAGGAAGAAC
TGGAGATATG GTGTGCTAGG CGCATTCATA ATAGCGTGGT TTATCTCGCC GGGAACAACA
GGAGGAGTGA TTGAAACCAC AATAGGAGTT ACTCTATCCA CCCTTTACTT TGTGGGAGTA
GCTACCTCAT ACTTAGCTGA GAGGAAGAGG AAATCTTGGG GTATATAA
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| Protein sequence | MTERTNELPK SQERPLLEHL NELIVRARRA LISLVIAFVI FFFFGITEVS FDGFNFPILY
PNLFNSISSH FIELFIHTEL PPQMKLLNLN PFDTLFSAAY VSFFLSLFIA LPIIVHEIWG
FVSPGLYEHE KRMAKMIVLP AFILFAAGSS FAYFVIIPVM MKFVLIYTTT LGVEPTLSLR
AFINTVMSLM LTVGVAFEYP LVMSMLTLAG VVKAQSWRKN WRYGVLGAFI IAWFISPGTT
GGVIETTIGV TLSTLYFVGV ATSYLAERKR KSWGI
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