Gene Msed_0792 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMsed_0792 
Symbol 
ID5105115 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMetallosphaera sedula DSM 5348 
KingdomArchaea 
Replicon accessionNC_009440 
Strand
Start bp724678 
End bp725262 
Gene Length585 bp 
Protein Length194 aa 
Translation table11 
GC content47% 
IMG OID640506697 
Producthypothetical protein 
Protein accessionYP_001190891 
Protein GI146303575 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.344893 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATCGTG ATGAACGGAC CACCTCTGAG GTAAGACTCG AGCTTCACCT TAACCCCTTC 
TCGTTTCACG AGACCACATC TAGGTACAGG GTTGAGGAGG AGGACAACTG GTTGAGGCTA
ACAGGAAAAG AGGGTGAGTA TCTAGCTCGA GAATTTGAGA CCTACGCTGT TCTTCTTTAC
CCTATCTCTT GGATTCCCAG AGAGCTCATT CTATCCCTAG ATCATAGGTT AACCTCGGTG
GATAAGTTAA GGGACGTCCT GATGAAGCCG ATGGATTGGA AGGACTTTGT CACATTCAGG
ATCAGGGAAG GTCAGATCAC CTCCTCAGAT CTTAAGCTAG AGAACTTCTT GGGAAGAGAC
CTTGTCAACA ATGTCCTTGA GTCGGAGGGT CTAGAGTTCG TGGAATTCGA CGAAGGCATT
GAGTTAGCCT GTAAACTTGA GAGTTTCAGC TGGCCAAGCC TTAACTTAGC GTTCTGGAAG
ATTTCAATGG GGCTCAGCCT CTACTTTGAG CTTAAACGTT ACCACGAAGA TATCTCCCTC
AGGCTAGCTC AGGAATATCT AAGCAGGTTT AATCCTCCTT CCTAG
 
Protein sequence
MNRDERTTSE VRLELHLNPF SFHETTSRYR VEEEDNWLRL TGKEGEYLAR EFETYAVLLY 
PISWIPRELI LSLDHRLTSV DKLRDVLMKP MDWKDFVTFR IREGQITSSD LKLENFLGRD
LVNNVLESEG LEFVEFDEGI ELACKLESFS WPSLNLAFWK ISMGLSLYFE LKRYHEDISL
RLAQEYLSRF NPPS