Gene Msed_0788 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMsed_0788 
SymbolfabG 
ID5103477 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMetallosphaera sedula DSM 5348 
KingdomArchaea 
Replicon accessionNC_009440 
Strand
Start bp721736 
End bp722458 
Gene Length723 bp 
Protein Length240 aa 
Translation table11 
GC content52% 
IMG OID640506693 
Product3-ketoacyl-(acyl-carrier-protein) reductase 
Protein accessionYP_001190887 
Protein GI146303571 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only 
COG ID[COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.596195 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAATTCA AGGGAAAGAC CTTTCTTCTT CTTGGGGTGA GCAAGGGATT AGGGTATGCC 
CTGGCCTACT TTCTAGCTAG GGAAGGGGCG ACCGTGATTG TGTCATCTAG GAGTTCAGAC
AAGTTAAAGG AGATTGAGGG AACTCTCAGG AAGTATGGTA ACGTGATCGC AATACCCGGT
GAGGTCAAGT CCAGGGAATC TGTAGAGGAA CTTAAATCCA AGGTGAAGAA GGTCACTGGG
GCTCTGGACG GGCTAGCAGT AATGATTGGA GGTTATGAAG AGGACACAGT TGAAGACCTG
AAGGGATTGG ACACTATGAT AAACAATCAC CTCAGGTATC CCCTACTCGC GGTCTCCGTG
CTACTGGATA TGATGAGGAA GGGGAGTACT ATCCTCCTGG TTTCAGCCCT GAGGGGCATT
GACAGGCCGG CCTCGACTCA ACTCTCCTAC GCTTCAGCTA AGGCTGGACT TGCCAAGGCG
GTCGAGGTCC TGGCACTGGA ACTCCTGGAT AGGGGTATAA GGGTAGTGGG GATAGCCCCT
AGCTGGATCG ATGGTGATTT TGTGCCCGAA AGGGATTGGA AAAAGCTAAG GAAATTGGGG
GATGAGAAGG CACCACCAGA GGATTTTGCC CTAGTCGCTT CCTGGCTCAT GAGTGATGAC
GCGGAGTGGG TTAACGGCGT TGTCATCCCC GTGGATGGGG GGACTAGGCT GAAGTGGGGA
TAG
 
Protein sequence
MKFKGKTFLL LGVSKGLGYA LAYFLAREGA TVIVSSRSSD KLKEIEGTLR KYGNVIAIPG 
EVKSRESVEE LKSKVKKVTG ALDGLAVMIG GYEEDTVEDL KGLDTMINNH LRYPLLAVSV
LLDMMRKGST ILLVSALRGI DRPASTQLSY ASAKAGLAKA VEVLALELLD RGIRVVGIAP
SWIDGDFVPE RDWKKLRKLG DEKAPPEDFA LVASWLMSDD AEWVNGVVIP VDGGTRLKWG