Gene Msed_0740 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMsed_0740 
Symbol 
ID5103778 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMetallosphaera sedula DSM 5348 
KingdomArchaea 
Replicon accessionNC_009440 
Strand
Start bp674844 
End bp675584 
Gene Length741 bp 
Protein Length246 aa 
Translation table11 
GC content45% 
IMG OID640506644 
ProductNAD(+) kinase 
Protein accessionYP_001190839 
Protein GI146303523 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0061] Predicted sugar kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.332155 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACTTA AAATCATAAG TAAGGAGTCT CCGCAGGTCT ATCCACTGGT TAGTAAGGCT 
AAGAGCATAG CTGAGTCCCT GGGATACATA ATCGACGAAA CAAACCCAGA TATTGTAATT
GCTATCGGAG GGGATGGAAC GCTTCTGAGA GCCATAGACT TTGGGAAGCC GATTATTACA
GTAAAGGCTG GAAGAAGAAG TTTTCTTATG GACGTTGATC CGCAGGATAT GGAGAACGTA
TTGAAGAGAC TTAAGGAGGG AGACTATTAC GTTTATGAGT ACCCTCTCCT GAGAGTGAGT
TACGGGAACA TTGCCAAGGA AGTGTTCAAC GAGGCAGGAA TACTGTACGA CGAGCCTGAG
AGCATCATCG TAACAGCCCA CTTCCAAGAG ACCAGTTTCA CATCCGAGGG AGATGGAATT
CTAGTTTCCA CGCCTCAAGG CTCCACTGGA TGGAGCATGT CCATCACAGG AGTTTACCTT
GGTGTTCCAA ACGCCCTTGA AATTTCGCTA GTTAGCCCAA TACTCTCGGC AGTAAAATCT
TTAATAGTTC CCAGAACTAG GATTAAACTG GTAATGGAAA GCAAAGGTTA CGATCAGAAG
GCAAGAATCG TGGCAGATGG AAACGTGATA GGACATGTTA AGCCTGGAGA TGTGGTTGAG
ATCACTCCTT CCAGGAACGC GATCGTGTAT AGGTTTTTTA AGATAGACCC CCTGAGAGGT
ATCTCGCCTT GGAGAAAGTG A
 
Protein sequence
MKLKIISKES PQVYPLVSKA KSIAESLGYI IDETNPDIVI AIGGDGTLLR AIDFGKPIIT 
VKAGRRSFLM DVDPQDMENV LKRLKEGDYY VYEYPLLRVS YGNIAKEVFN EAGILYDEPE
SIIVTAHFQE TSFTSEGDGI LVSTPQGSTG WSMSITGVYL GVPNALEISL VSPILSAVKS
LIVPRTRIKL VMESKGYDQK ARIVADGNVI GHVKPGDVVE ITPSRNAIVY RFFKIDPLRG
ISPWRK