Gene Msed_0723 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMsed_0723 
Symbol 
ID5103761 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMetallosphaera sedula DSM 5348 
KingdomArchaea 
Replicon accessionNC_009440 
Strand
Start bp659813 
End bp660460 
Gene Length648 bp 
Protein Length215 aa 
Translation table11 
GC content50% 
IMG OID640506627 
Productchlorite dismutase 
Protein accessionYP_001190822 
Protein GI146303506 
COG category[S] Function unknown 
COG ID[COG3253] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.996337 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGGTTT TATCCATAAG GTTTCTCCCC CAATGGTGGT CCCTAAGTAA AGGGGAGAGG 
GCGAAGATCC TCGGATTGGT CAAGGAAGTT GAGGAGCAGG AGGGCAAGAA CTTCATTTCC
ATTAGGAGAT ATGCCTCCAT AAACCGTTCC TCTTCCTTGG TTTACTGGTT GTCCAGTGAA
ACCACCACCC CTCTTGTGAA GTTCAGGTCA TCCCTTCTCT CTGCCCTCAG AGGGTATGCT
GACGAGGACG TGTTACTTTT CTCGGTGTTC AGGCCATCCC CTTACACTAG GGGTAACTTC
AACCCCAAGG ACGTGCTTAA CTCTCCTCCC CTGAAGTACT TCGTCGCCTA CCCCATGAAA
AAGGACGTTG AATGGTACCT AATTCCCTTC CAAGAGAGGG AGGAGATCAT GAGGGAGCAC
ATAAAGGTCG CTAGGGAGCA TCCAGGGAAC AAGGGGATAA GATCCTACAC AACTTACTCC
TTTGGAATAG CGGACTACGA GTTTGTGGTG ATTTACGAAA TCCCGTCCCT GCCTGAGTGG
ATACAGGTCG TCGAGGCACT TAGGGAAGTT AGAGCTAGGA AGTGGATAAC CAAGGAGGAA
CCCCTAGTAA CTGGGGAACT CATGGGCCTA GAATTCCTTT ACTCTTGA
 
Protein sequence
MQVLSIRFLP QWWSLSKGER AKILGLVKEV EEQEGKNFIS IRRYASINRS SSLVYWLSSE 
TTTPLVKFRS SLLSALRGYA DEDVLLFSVF RPSPYTRGNF NPKDVLNSPP LKYFVAYPMK
KDVEWYLIPF QEREEIMREH IKVAREHPGN KGIRSYTTYS FGIADYEFVV IYEIPSLPEW
IQVVEALREV RARKWITKEE PLVTGELMGL EFLYS