| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_0703 |
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| Symbol | |
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| ID | 5105309 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Metallosphaera sedula DSM 5348 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009440 |
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| Strand | - |
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| Start bp | 639975 |
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| End bp | 641267 |
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| Gene Length | 1293 bp |
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| Protein Length | 430 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640506607 |
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| Product | isocitrate dehydrogenase |
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| Protein accession | YP_001190802 |
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| Protein GI | 146303486 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0538] Isocitrate dehydrogenases |
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| TIGRFAM ID | [TIGR00183] isocitrate dehydrogenase, NADP-dependent, prokaryotic type |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.0523745 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTCCGAAC CCCTCATCAT CCAAAAAGTT AAAAGTTGTT CGAACTACCT AACTTTCATG
TCGCATGTCC CGGACGATGG TGAAAAAATC TCGTTCCAAA ACGGGAGATG GATAGTTCCC
AACAAACCTG TCATTCTCTA TATCGAGGGA GACGGTATAG GACCCGAGAT TGTGACCTCT
GCGAGACAAG TAGTGGACAA GGCTGTGGAA AAGGCCTATG GCTCCAAGAG GGAGATCAAG
TGGGTTGAGG TACTAGCTGG CGATAAGGCC TTCGCGAAGA CAGGGGATAG GTTTCCCAAG
GAGACCCAGG AGATGCTCCT GAACTACAGG GTAGTGGTTA AGGGTCCCCT CGAGACTCCC
ATTGGAAAGG GATGGAAATC CGTGAACGTG GCCATCAGGC TCATGCTGGA CCTTTACGCA
AACATTAGGC CGGTGAAGTA TATAGATGGA CTCGAGTCTC CGCTAAAGGA ACCAAACAAG
GTGGACATGA TCATTTTCAG GGAAAACACA GACGACCTAT ATAGGGGTAT AGAGTACACA
TACGACAGCG AGGAGGCCAA GAAGATAAGG TCATTCCTTA AGAACGAGTT ACACGTTGAT
GTAGAGGACG ATACTGGAAT TGGTATCAAG GTAATAAGCA AGTTCAAGAC CGAGAGGATC
ACGAGGATGG CCATGAATTA CGCCATTGAA CACGGAAGGA GAAAGTTAAC CATAATGCAC
AAGGGGAACG TGCTCAAGTA CACTGAGGGA GCTTTTAGGG ATTGGGCCTA CGACCTTATC
AAGAGAGAGT ACAGGGACAA GGTAGTGACG GAGGAGGAAA TCATGAAGGA CTACAACGGT
AAAGCTCCTG AGGGAAAAAT AGTGGTGAAT GACAGGATAG CTGACAACAT GTTCCAACAG
ATTATCACGA GACCAGATGA GTACGACGTC ATTCTAGCTC CCAACCTTAA TGGAGATTAC
ATATCCGACG CGGCCGGAGC TCTTATAGGA AACATTGGTA TGCTTGGCGG GGCCAACATA
GGCGACTCGG GTGGAATGTT TGAGGCAATA CACGGCACTG CCCCCAAGTA CGCAGGAAAG
AACATGGCGA ATCCCACGGG AATAATTAAG GGATGCGAAC TTATGTTAAG ATTCATGGGG
TGGAACGAGG CTGCAGATCT AGTGGAGAAG TCCGTGTTGA GGGCCGTCTC CGCCAAGAGG
GTTACTCAGG ATCTTGCTAG GTTTATGGGA GTTAAGGCCT TGAGTACCAC TGAGTTCACA
AAGGAACTTA TCAATATCAT GGACACCCTC TAA
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| Protein sequence | MSEPLIIQKV KSCSNYLTFM SHVPDDGEKI SFQNGRWIVP NKPVILYIEG DGIGPEIVTS
ARQVVDKAVE KAYGSKREIK WVEVLAGDKA FAKTGDRFPK ETQEMLLNYR VVVKGPLETP
IGKGWKSVNV AIRLMLDLYA NIRPVKYIDG LESPLKEPNK VDMIIFRENT DDLYRGIEYT
YDSEEAKKIR SFLKNELHVD VEDDTGIGIK VISKFKTERI TRMAMNYAIE HGRRKLTIMH
KGNVLKYTEG AFRDWAYDLI KREYRDKVVT EEEIMKDYNG KAPEGKIVVN DRIADNMFQQ
IITRPDEYDV ILAPNLNGDY ISDAAGALIG NIGMLGGANI GDSGGMFEAI HGTAPKYAGK
NMANPTGIIK GCELMLRFMG WNEAADLVEK SVLRAVSAKR VTQDLARFMG VKALSTTEFT
KELINIMDTL
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