Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Msed_0703 |
Symbol | |
ID | 5105309 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Metallosphaera sedula DSM 5348 |
Kingdom | Archaea |
Replicon accession | NC_009440 |
Strand | - |
Start bp | 639975 |
End bp | 641267 |
Gene Length | 1293 bp |
Protein Length | 430 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 640506607 |
Product | isocitrate dehydrogenase |
Protein accession | YP_001190802 |
Protein GI | 146303486 |
COG category | [C] Energy production and conversion |
COG ID | [COG0538] Isocitrate dehydrogenases |
TIGRFAM ID | [TIGR00183] isocitrate dehydrogenase, NADP-dependent, prokaryotic type |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.0523745 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCGAAC CCCTCATCAT CCAAAAAGTT AAAAGTTGTT CGAACTACCT AACTTTCATG TCGCATGTCC CGGACGATGG TGAAAAAATC TCGTTCCAAA ACGGGAGATG GATAGTTCCC AACAAACCTG TCATTCTCTA TATCGAGGGA GACGGTATAG GACCCGAGAT TGTGACCTCT GCGAGACAAG TAGTGGACAA GGCTGTGGAA AAGGCCTATG GCTCCAAGAG GGAGATCAAG TGGGTTGAGG TACTAGCTGG CGATAAGGCC TTCGCGAAGA CAGGGGATAG GTTTCCCAAG GAGACCCAGG AGATGCTCCT GAACTACAGG GTAGTGGTTA AGGGTCCCCT CGAGACTCCC ATTGGAAAGG GATGGAAATC CGTGAACGTG GCCATCAGGC TCATGCTGGA CCTTTACGCA AACATTAGGC CGGTGAAGTA TATAGATGGA CTCGAGTCTC CGCTAAAGGA ACCAAACAAG GTGGACATGA TCATTTTCAG GGAAAACACA GACGACCTAT ATAGGGGTAT AGAGTACACA TACGACAGCG AGGAGGCCAA GAAGATAAGG TCATTCCTTA AGAACGAGTT ACACGTTGAT GTAGAGGACG ATACTGGAAT TGGTATCAAG GTAATAAGCA AGTTCAAGAC CGAGAGGATC ACGAGGATGG CCATGAATTA CGCCATTGAA CACGGAAGGA GAAAGTTAAC CATAATGCAC AAGGGGAACG TGCTCAAGTA CACTGAGGGA GCTTTTAGGG ATTGGGCCTA CGACCTTATC AAGAGAGAGT ACAGGGACAA GGTAGTGACG GAGGAGGAAA TCATGAAGGA CTACAACGGT AAAGCTCCTG AGGGAAAAAT AGTGGTGAAT GACAGGATAG CTGACAACAT GTTCCAACAG ATTATCACGA GACCAGATGA GTACGACGTC ATTCTAGCTC CCAACCTTAA TGGAGATTAC ATATCCGACG CGGCCGGAGC TCTTATAGGA AACATTGGTA TGCTTGGCGG GGCCAACATA GGCGACTCGG GTGGAATGTT TGAGGCAATA CACGGCACTG CCCCCAAGTA CGCAGGAAAG AACATGGCGA ATCCCACGGG AATAATTAAG GGATGCGAAC TTATGTTAAG ATTCATGGGG TGGAACGAGG CTGCAGATCT AGTGGAGAAG TCCGTGTTGA GGGCCGTCTC CGCCAAGAGG GTTACTCAGG ATCTTGCTAG GTTTATGGGA GTTAAGGCCT TGAGTACCAC TGAGTTCACA AAGGAACTTA TCAATATCAT GGACACCCTC TAA
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Protein sequence | MSEPLIIQKV KSCSNYLTFM SHVPDDGEKI SFQNGRWIVP NKPVILYIEG DGIGPEIVTS ARQVVDKAVE KAYGSKREIK WVEVLAGDKA FAKTGDRFPK ETQEMLLNYR VVVKGPLETP IGKGWKSVNV AIRLMLDLYA NIRPVKYIDG LESPLKEPNK VDMIIFRENT DDLYRGIEYT YDSEEAKKIR SFLKNELHVD VEDDTGIGIK VISKFKTERI TRMAMNYAIE HGRRKLTIMH KGNVLKYTEG AFRDWAYDLI KREYRDKVVT EEEIMKDYNG KAPEGKIVVN DRIADNMFQQ IITRPDEYDV ILAPNLNGDY ISDAAGALIG NIGMLGGANI GDSGGMFEAI HGTAPKYAGK NMANPTGIIK GCELMLRFMG WNEAADLVEK SVLRAVSAKR VTQDLARFMG VKALSTTEFT KELINIMDTL
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