| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_0691 |
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| Symbol | |
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| ID | 5105297 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Metallosphaera sedula DSM 5348 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009440 |
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| Strand | + |
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| Start bp | 630829 |
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| End bp | 631668 |
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| Gene Length | 840 bp |
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| Protein Length | 279 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640506595 |
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| Product | polyprenyl synthetase |
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| Protein accession | YP_001190790 |
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| Protein GI | 146303474 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0142] Geranylgeranyl pyrophosphate synthase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.0270434 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 1 |
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| Fosmid unclonability p-value | 0.00000384751 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGAATTCT GGTTTAGGAG CAGGGCCGTC ATTGACGAGC TTGTGGAGAA ATTCCTCGAC
GAGTCGAAGG AATGGGAAAC CATGGAGATG TCGAAGTACA TAATGAGGGA TGGTAAAAGA
TTCAGAGGAA CTCTCATGTT TCTCTTCAAT GGAGCCCTAG GAGGGGAGGA GAAGGATGCT
TATCCTGGTG CCCTCGCAAC TGAAATTCTC CACTCCGCCT CCCTAGCCCT GGATGACATA
GTGGATTATG ACGAAATAAG GAGAGGAATG AAGGCTGCTT GGGCAGTCTA CACGAACAGG
AAGGTAATAT TCGTGTCCAA TTACCTTATT CCCACGGCCC TGAGCATAAT CTCGGGCTAC
GGAGATAAGG CCCTGAGGAT CAGCGTGGAT CTGTGGAAAG ACACTGCGGT GGGAGCCCTT
AAGGATATGT ACGGAAAAGA CGAGGACTAC GTGAGGACCA TTGAACTCAA GACTGCCTCC
CTCTTTAAAC TTCCAACAAT GCTCTCCTCC TTTTCTTCAG GAAGGAGCGA GTTCCTTGAT
ACTCTCATGG AGGCTGGTAA GGACCTGGGT ATAATATACC AGCTAATAGA CGATTACGTG
GATTGCGTTA CGCAGGACAA GGACAAGCTA GTGGGGAGCG CGAGGCAACT ATTTTCCTTG
ACCTCGGGGA AGTTCGAGTC CTTCGTTAGG ATGAAGTATA GGGAATACAA GGAACATTAC
GAGACTCTCC TAAGATCGCT TCCAGTTAAG CACGATTACC TAGACCAGCT TGTTGCTCTC
CCTGACTTTT TGGCCTTCGG TCTCATGGGG GAAGCCGGAA TAAAGAATAA AATATTTTAG
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| Protein sequence | MEFWFRSRAV IDELVEKFLD ESKEWETMEM SKYIMRDGKR FRGTLMFLFN GALGGEEKDA
YPGALATEIL HSASLALDDI VDYDEIRRGM KAAWAVYTNR KVIFVSNYLI PTALSIISGY
GDKALRISVD LWKDTAVGAL KDMYGKDEDY VRTIELKTAS LFKLPTMLSS FSSGRSEFLD
TLMEAGKDLG IIYQLIDDYV DCVTQDKDKL VGSARQLFSL TSGKFESFVR MKYREYKEHY
ETLLRSLPVK HDYLDQLVAL PDFLAFGLMG EAGIKNKIF
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