| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_0680 |
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| Symbol | |
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| ID | 5105286 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Metallosphaera sedula DSM 5348 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009440 |
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| Strand | + |
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| Start bp | 622175 |
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| End bp | 623776 |
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| Gene Length | 1602 bp |
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| Protein Length | 533 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 640506584 |
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| Product | hypothetical protein |
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| Protein accession | YP_001190779 |
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| Protein GI | 146303463 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3356] Predicted membrane protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.000787674 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 1 |
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| Fosmid unclonability p-value | 0.00000670884 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | GTGGATTCGG AAAAACTAAC TAGGAATTAC TATTCCAAGC TCATAAGGTT ACCATCAACA
GAGGCCCTTT CAATCTGGGT GGGAGCGGAA GTAGGTCTAT CCTTTCTGAG GTCGCTATCT
GACGGATTCA CGTATTTGAC AGGCTTCCTA GTGTACTTGT CCTTGTCCCT AATATCCCTT
CACAGAAGAG TTAGAACTTT CCTTGCAATG GCGGGAATGT TTGGTATTAT CTACTTGATA
ATCTCGTTCT TTCCTTTGGT AATACCCCTC TCCTTTGGCC TCTTTATTCC CCTTATGACT
TACGTTATGT TAATAGATTA CGGGGATTTC ACTTCGCCGG GCCTAACCAC GCTAATAGGC
CTGATCTCGG CACTTTCCAC GTTTCCAAGG AATATTGAAC TAGTTATTGC CTTCTACTTG
ATCGTGGGGC TATTTTCCTA CTTATACTTG ATCCTTGTTA ACAGAAAAGG GAAAAGCGTC
ACAGGCATTC CATCTCTGAA CATTGTTAGA CCTTTCCTGA AGGCTATGAG CTACAGGAGG
GACGAGGAAG TTGAAAACTT CCTGGAAAAG ATATCTACCG AATTTCACTC AAGCACACTT
GTACTGAAAC TTGGAGACGT TCTTCTAGTT TTACCCAGAA TACACTTTGG TATGTACGGA
AAGGTGGGGA GTTCCCTATT TCCCTATCAG CTGGAGGAGT TAGTGAACAA CAAGGTAATG
GTATTTCACG GTCCTGGAAG CCACGAGATA GATCTGGCCT CAAGCAAGGA GTCACGTAAG
CTTGCACAGA TAATCTCCTC GAAGATCAGG GAGGGGAATT GGAAGGAGTT AAGGTTTGAG
GGGATAAAGT TCCTATCTGA GGACAGGTTT AGGATGACCT CCCTCGTGTT CGACCATATA
ACGCTGAACT TCAGCGAGAG ACCGGGCTAC GGAATAGATG ATCTTCCTGG AGGGTTATGG
GACGAATCAC TGAAGACAGG TAATTTCCTA GTTGATTGCC ACAACGAGTC TCTAAAGGAG
GAAATAGGGC ACAGGGATGA AAGAGCCTTA AGGGAATTCG TATCCAAGAA GATTCCAGCT
ACCGAGGAGA GACCTCTCCT AGTGGGATAC GGTGAGTCTG AAATTAACTC AACATGTGAG
GGGATCTGTA GTCGTAAAGT TAAGGCACTT ATAGTTGGAG ATGGGGACAA AAAGATAGTA
ATTGCCTACG TGTTTGCCAA TAACGCCAAT GAGGAGACTG GGAAGTTATT ACGCGAGAAG
TTTGGTAACC TTTACGAGAA GGTCATCCTC GTCACACCTG ACGATCATTC ATGTACAGGA
ACATCCTTTG GAAACCTCTA CACTCCAGCA GAGCCTTGCC CACAGATACT GGAAGCCCTG
GAGAAAGCGA TCAAAAATGC TGAAGCAAAC CTCAAGAAAG TAGAGGCAAG CTACATGATA
GTGGATGCGA AAGTGAAGGT AATTGGAAAA TTTATTTCGT TGATGGTGGA GGGGCTGGAG
CAGGTAGGGA GCTTTGCTAT GAGAACGTTC TGGATCCCTG TGATCTTTCC ATACGTAGCC
CTTATAATTC TTCTACTTGG AAATTACCTT GTCAAATTCT AA
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| Protein sequence | MDSEKLTRNY YSKLIRLPST EALSIWVGAE VGLSFLRSLS DGFTYLTGFL VYLSLSLISL
HRRVRTFLAM AGMFGIIYLI ISFFPLVIPL SFGLFIPLMT YVMLIDYGDF TSPGLTTLIG
LISALSTFPR NIELVIAFYL IVGLFSYLYL ILVNRKGKSV TGIPSLNIVR PFLKAMSYRR
DEEVENFLEK ISTEFHSSTL VLKLGDVLLV LPRIHFGMYG KVGSSLFPYQ LEELVNNKVM
VFHGPGSHEI DLASSKESRK LAQIISSKIR EGNWKELRFE GIKFLSEDRF RMTSLVFDHI
TLNFSERPGY GIDDLPGGLW DESLKTGNFL VDCHNESLKE EIGHRDERAL REFVSKKIPA
TEERPLLVGY GESEINSTCE GICSRKVKAL IVGDGDKKIV IAYVFANNAN EETGKLLREK
FGNLYEKVIL VTPDDHSCTG TSFGNLYTPA EPCPQILEAL EKAIKNAEAN LKKVEASYMI
VDAKVKVIGK FISLMVEGLE QVGSFAMRTF WIPVIFPYVA LIILLLGNYL VKF
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