| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_0667 |
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| Symbol | |
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| ID | 5105273 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Metallosphaera sedula DSM 5348 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009440 |
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| Strand | - |
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| Start bp | 609730 |
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| End bp | 611085 |
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| Gene Length | 1356 bp |
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| Protein Length | 451 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640506571 |
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| Product | von Willebrand factor, type A |
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| Protein accession | YP_001190766 |
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| Protein GI | 146303450 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2425] Uncharacterized protein containing a von Willebrand factor type A (vWA) domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.949287 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.0104959 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAGGTC TCCTTAGAGG TGTAGATTAC GAAAGCCCCG TTGTAAAGTA CAGGGGCGAG
AGGATACTCA ACACCCTAAG GAGGGTCTCT GGGAAGGAAA GCAACGTAGA TCCCCTATTC
CTCATTGATA CCTATTACGT GCACTATCTC CCCCTACCTA TACTAAAAAC AAAGGGGGAA
ATAGATCAAA GCGACTCCAT TAAGTACTCA TTGATTGATC TTACCATTTC GTCAGAGATT
GTAAACAGGA ACAGAAACTA CTCAATTGCA AACTCAGCAG TGAGTATGGC CCTTTCCGTG
AGTTATGTGC AAAACTTGAT AGAGGAATTG GAGAGAATTA GGAGGACTTC ACAGTCGCAG
GAGGAGAGAG AGGCCGCAGA GCAGATCCTT AACGGAATAA TGAAGGGAAG TCAGGGTAAG
GAGGGAAAGC AGAATCAGAA CCAGCAACAG GAAAACCAGA CCACTGGAAA GCTAATGAAG
CAGGTTCATG AAAAGGCTAT GGCAAAGGCG TCTGAGGATG CTAATTCCGT CAGGAGTATG
CAGAGGATAG TTGGAGGTAA TGGGGCCGGT ACAGGATCGA TGATGAACTT TGAGGGAGAT
ATACACGACG TGCTAAGACT AGCTAGGAAC ACGGAGATCA AGAAGATCCT GGAGTTTCTG
AGCGGTATCC CGAAGCTGGG TAGCTTCACC AAGAAGAGGA CCACAAGATA TGCTAGGGGA
GAGCTTTATG GATATGAGGA AGGTTCAGAC CTAGAGAGAC TGGTTCCCTC AGAACTGGCC
TTACCCGAGG AACTCTTTGA TGTGAAGCTT GCAGAGAGCC AGCTATTACT ATATCAGAAA
CAGATTAAGG AAACCCTAGG ACCCATATAT CTACTATTGG ACAAGTCAGG CAGCATGGAT
GGAGAAAAGA TCCTGTGGGC TAAGGCTGTA GCACTGGCCC TCTACAGTAG GGCTAGAAGG
GAGAACAGGG ACTTCTATCT AAGGTTCTTC GATAACATTC CATATCCTCT GATCAAGGTC
ATAAAGAATG CCAAGAGCAA GGACGTGATC AAGATGGTAG AGTATATTGG GAAGATAAGA
GGTGGAGGCG GAACAGATAT ATCTAGATCT GTAATGTCTG CCTGCGACGA TATAAAGGAC
GGTCATGTTA GGGGTGTAAG CGAGGTCATA ATTTTGACGG ATGGAGAGGA TAAGATCGCT
GAAACCACTG TTAGGAGATC CCTTAAAGAG GCAAATGCTA CGCTCATTAG CGTGATGATA
AGAGGAGATA ACGCGGATCT AAAGAGAGTT TCAGATAACT ACCTAGTGGT TTACCGTCTA
GATCAGGGAG ACCTACTTAG GGTAGTTGAA TCCTAA
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| Protein sequence | MTGLLRGVDY ESPVVKYRGE RILNTLRRVS GKESNVDPLF LIDTYYVHYL PLPILKTKGE
IDQSDSIKYS LIDLTISSEI VNRNRNYSIA NSAVSMALSV SYVQNLIEEL ERIRRTSQSQ
EEREAAEQIL NGIMKGSQGK EGKQNQNQQQ ENQTTGKLMK QVHEKAMAKA SEDANSVRSM
QRIVGGNGAG TGSMMNFEGD IHDVLRLARN TEIKKILEFL SGIPKLGSFT KKRTTRYARG
ELYGYEEGSD LERLVPSELA LPEELFDVKL AESQLLLYQK QIKETLGPIY LLLDKSGSMD
GEKILWAKAV ALALYSRARR ENRDFYLRFF DNIPYPLIKV IKNAKSKDVI KMVEYIGKIR
GGGGTDISRS VMSACDDIKD GHVRGVSEVI ILTDGEDKIA ETTVRRSLKE ANATLISVMI
RGDNADLKRV SDNYLVVYRL DQGDLLRVVE S
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