| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_0639 |
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| Symbol | |
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| ID | 5103799 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Metallosphaera sedula DSM 5348 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009440 |
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| Strand | + |
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| Start bp | 586507 |
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| End bp | 586929 |
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| Gene Length | 423 bp |
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| Protein Length | 140 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640506543 |
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| Product | methylmalonyl-CoA epimerase |
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| Protein accession | YP_001190738 |
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| Protein GI | 146303422 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0346] Lactoylglutathione lyase and related lyases |
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| TIGRFAM ID | [TIGR03081] methylmalonyl-CoA epimerase |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.237468 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.259775 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGAAACCT TAGATATAGA TCACGTGGGA GTTGCAGTTG AAAATCTAGA GGAAGCCATA
AAGTTATACA CAGAGAAGAT GGGAATGAAA CTGGTGCATC GGGAGGATTT ACCGGACAGG
GGAATAAAGG TGGCCTTCCT CACGGGAAAT GAAGGAACCA CTGCGGTAGA ACTCATGGAG
CCCATGAATC ATGAGGATCC AAATAACACT GTGGCGAAGT TTCTAAAAAC AAGGGGACAG
GGGATGCATC ACCTGGCAGT TAAGGTAAAG GATATCAATT CCTCCCTGAG AGACCTAGAG
GGGAAGGGAT TAACCTTGAT TGACAAGAAC GGTAGAAAGG GGGCCAGGGG TCACCTGGTG
GCCTTCGTTC ATCCAAAGAG CGTTATGGGT CTCCTCCTGG AACTCGTTCA AGAAACCCAT
TAA
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| Protein sequence | METLDIDHVG VAVENLEEAI KLYTEKMGMK LVHREDLPDR GIKVAFLTGN EGTTAVELME
PMNHEDPNNT VAKFLKTRGQ GMHHLAVKVK DINSSLRDLE GKGLTLIDKN GRKGARGHLV
AFVHPKSVMG LLLELVQETH
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