| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_0598 |
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| Symbol | |
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| ID | 5105570 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Metallosphaera sedula DSM 5348 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009440 |
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| Strand | + |
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| Start bp | 551798 |
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| End bp | 552847 |
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| Gene Length | 1050 bp |
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| Protein Length | 349 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640506502 |
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| Product | DNA polymerase IV |
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| Protein accession | YP_001190697 |
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| Protein GI | 146303381 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0389] Nucleotidyltransferase/DNA polymerase involved in DNA repair |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.99372 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATTGTAT TATTTGTTGA CTTTGACTAT TTCTTTGCTC AGGTTGAGGA GATCCTCAAT
CCCTCGTTGA AAGGTAAGCC CGTGGTTGTT TGCGTCTACT CAGGGAGGAC GAAGGACAGC
GGAGCAGTGG CAACGTCCAA CTACGAGGCG AGGAAATTGG GAATTAAGGC TGGAATGCCT
ATAATCAAGG CCAAGGAGAT CGGGAAAGAT GCCGTGTTCC TTCCCATGAG AAAGGAAGTA
TACCAGCAGG TATCACGAAG GGTTATGAAC ATAATTTCGG GGTACGGGGA TAAACTGGAG
ATAGCCAGCA TAGACGAGGC CTACCTGGAT ATAACCAGGC GGGTGAAGGA CTTTGACGAG
GCGAAGGAGC TGGCGAGGAA GTTAAAGGCT GAAGTACTGG AGAAGGAAAG GCTCAGGGTA
ACCGTGGGAA TAGGCCCCAA CAAGGTTGTT GCAAAGATAA TTGCAGATAT GAATAAACCA
GATGGGTTGG GAATTATCTA CCCTGAGGAG GTTAAGGATT TCCTCTATAA CCTTGACATA
TCCAAGGTAC CTGGAGTAGG AAAAATAACT GAAGAGATCC TGAGAAAGGT CGGAATCAAT
AGACTAGGCG ACGTCATCAA TAAATCGGGG GAACTCGTCA ATCTTGTGGG GAAGAGTAAA
GCCAATTACC TGTTGAGCCT GGCAAATAAC ACGTATCATG ATCCAGTTGA ATCTAGGGAG
ATAACCCATA GGGGGAGATA CGTCACCTTA CCTGAAAATA CCAGAGACCT AAATAGGATA
CTTCCATCGT TGAAGAGGTC CATAGAGGAG GCCTACTCCA AGGTGGATGG TATTCCCATG
GAGATTTACG TTGTGGCGAT CATGGAGGAC TTGGATATAG TGAGCAAGGG GAAGAGTTTC
AAGTTCGGGG TTTCCCAGGA TAGGGCACTC TCTGTGGCTC AGGAGTTGTT AAACAAGATT
CTCGAGTCCG ATAAAAGGAA ACTGAGAAGG GTAGGGGTAA GGCTGGGGAA GATAACTAAG
TCCTCAACCC TAGAGGACTT CCTCCACTGA
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| Protein sequence | MIVLFVDFDY FFAQVEEILN PSLKGKPVVV CVYSGRTKDS GAVATSNYEA RKLGIKAGMP
IIKAKEIGKD AVFLPMRKEV YQQVSRRVMN IISGYGDKLE IASIDEAYLD ITRRVKDFDE
AKELARKLKA EVLEKERLRV TVGIGPNKVV AKIIADMNKP DGLGIIYPEE VKDFLYNLDI
SKVPGVGKIT EEILRKVGIN RLGDVINKSG ELVNLVGKSK ANYLLSLANN TYHDPVESRE
ITHRGRYVTL PENTRDLNRI LPSLKRSIEE AYSKVDGIPM EIYVVAIMED LDIVSKGKSF
KFGVSQDRAL SVAQELLNKI LESDKRKLRR VGVRLGKITK SSTLEDFLH
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