Gene Msed_0557 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMsed_0557 
Symbol 
ID5103717 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMetallosphaera sedula DSM 5348 
KingdomArchaea 
Replicon accessionNC_009440 
Strand
Start bp511991 
End bp512809 
Gene Length819 bp 
Protein Length272 aa 
Translation table11 
GC content50% 
IMG OID640506461 
Producthypothetical protein 
Protein accessionYP_001190656 
Protein GI146303340 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGTGAGC TAGATTTTTT GCTGAAGAGA AAGAAGAAGA CCGAAGGAGT TCAGGGAGGA 
GAGAGTGGAG GGCAGAGAGT AGAGAGTAGA GTTCAGGGAG GAGAGAGTGG AGGGCAGAGA
GTAGAGAGTA GAGTTCAGGG AGGAGAGAGT GGAGGGCAGA GAGTAGAGAG TAGAGTTCAG
GGAGGAGAGA GTGGAGGGCA GAGAGTAGAG AGTAGAGTTC AGGGAGGAGA GAGTGGAGGG
CAGAGAGTAG AGAGTAGAGT TCAGGGAGGA GAGAGTGGAG GGCAGAGAGT AGAGAGTAGA
GTTCAGGGAG GAGAGAGTGG AGGGCAGAGA GTAGAGAGTA GAGTTCAGGG AGGAGAGAGT
GGAGGGCAGA GAGTAGAGAG TAGAGTTCAG GGAGGAGAGA GTGGAGGGCA GAGAGTAGAG
AGTAGAGTTC AGGGAGGAGA GAGTGGAGGG CAGAGAGTAG AGAGTAGAGT TCAGGGAGGA
GAGAGTGGAG GGCAGAGAGT AGAGTCCATA CAGATCTCTC CAGAGACTGA TAGTCATCAG
AACGGAAATA CGGAGCAAAC CACACAGACA GTTACCCAAA CTTCAGTAGA TCAGACCAGT
CTTGAACAAC TAATGGAATC ACTCCTGGAT AAGGATCCTA AAATAGGAGT TTGGAGCTAT
CCGGGCTACG CGGTACTACA GTACCTGTAT CATACAAAGC CTGGGTTTAG AATGAGTAAG
GTAGCCAAAG ACGCACTAGA ATTAGGATTA AAACAGCTTT ATCCAGATCT CTACTCTAAA
GCCGAGTCCT TAGCTAGACA GAAGGGACTA ATCAAATGA
 
Protein sequence
MSELDFLLKR KKKTEGVQGG ESGGQRVESR VQGGESGGQR VESRVQGGES GGQRVESRVQ 
GGESGGQRVE SRVQGGESGG QRVESRVQGG ESGGQRVESR VQGGESGGQR VESRVQGGES
GGQRVESRVQ GGESGGQRVE SRVQGGESGG QRVESRVQGG ESGGQRVESI QISPETDSHQ
NGNTEQTTQT VTQTSVDQTS LEQLMESLLD KDPKIGVWSY PGYAVLQYLY HTKPGFRMSK
VAKDALELGL KQLYPDLYSK AESLARQKGL IK