| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_0540 |
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| Symbol | |
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| ID | 5103700 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Metallosphaera sedula DSM 5348 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009440 |
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| Strand | - |
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| Start bp | 495817 |
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| End bp | 496797 |
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| Gene Length | 981 bp |
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| Protein Length | 326 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640506444 |
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| Product | FAD dependent oxidoreductase |
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| Protein accession | YP_001190639 |
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| Protein GI | 146303323 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0665] Glycine/D-amino acid oxidases (deaminating) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.711778 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGAAGATCG TAATAGTTGG AAGAGGTATT CTGGGAAGCT CACTCTATCA CCTATTGAGG
AGAAAAGGTC ACGAGGTCAA GGTGATAGAG TCAGGAGAAA GGAGAGTCTT CCCTAGTCTG
ATACATTCCC TACTTCTTAA GGACAGGGAC ATTGAGCTTG CGAGGATGAG CCTGGATTTC
TACAGAGAGT TTTCAGTCCC GATGAAGGAG TTCATCTCAA TAACCCTTGG TAAGGTCGAC
AGTGAAATCC TGAATTCCTG GGAAAGAGCA GGCGTAGAGA TAAGGGAGGA ACACGTGAGC
TGGCTCAAAG CTAATGGTAT AGTTGCGAGG GGCGGAGATA GGCTTGTTTA CATCTCAAGG
CTAATATCCT CAGTTCCGTT TGTGAGGGGA AAGGCTAAGA TTGACCTACT TAAGGAGAAA
GTCTATTTGG ATGGGAAGGA GATTCATGCC GATAAGTATC TAGTAGTTGC GGGACCGTGG
AACCCATGTC TCCTTGGGGT GAAGACGAAG AGCTATTACT GTTGGGCGAC CCTTGTGGCC
AGCGGGGTCA AGGAATTGGG AAACCACTTC ATATATGACT ATGAGAAAGG GTTTTACTCT
AGACCTCTCC TGGGTCTTGG AACAGGAATA GCCATTGTGG GGGACGGAAG GGCCATAGAG
TCTCCCCCTG GGAGAAGGAT TCCTGTGGAC GAGAATGAAG TCTTGGACAG GGCAAGGGAG
AGACTAGGAT CTCTTCATCC CCTTTACACG GCCGGAGAGT TCTGTGAGGG GACGCCAGAC
ATGAGACCAG CTTACGGTCC CATGACGGAC AAAATTCTTT ACGCAGGCGG TTTAGATGGG
TACGGTGCTG AGGTAGGGCC TGGACTGGCC AAGCTTGTCG TCGAATTTAT TGAGACTGGG
GAGAAGATTA AGGAGTATTT TCTAGATAGG TTCACTGGGG TCACGGATTT CACCGTAGGG
AGGGAGCCCC ACGAGATATA A
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| Protein sequence | MKIVIVGRGI LGSSLYHLLR RKGHEVKVIE SGERRVFPSL IHSLLLKDRD IELARMSLDF
YREFSVPMKE FISITLGKVD SEILNSWERA GVEIREEHVS WLKANGIVAR GGDRLVYISR
LISSVPFVRG KAKIDLLKEK VYLDGKEIHA DKYLVVAGPW NPCLLGVKTK SYYCWATLVA
SGVKELGNHF IYDYEKGFYS RPLLGLGTGI AIVGDGRAIE SPPGRRIPVD ENEVLDRARE
RLGSLHPLYT AGEFCEGTPD MRPAYGPMTD KILYAGGLDG YGAEVGPGLA KLVVEFIETG
EKIKEYFLDR FTGVTDFTVG REPHEI
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