| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_0467 |
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| Symbol | |
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| ID | 5105463 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Metallosphaera sedula DSM 5348 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009440 |
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| Strand | + |
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| Start bp | 421881 |
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| End bp | 422960 |
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| Gene Length | 1080 bp |
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| Protein Length | 359 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 640506373 |
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| Product | major facilitator transporter |
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| Protein accession | YP_001190568 |
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| Protein GI | 146303252 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.0594986 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAGGA CACTCCTGGC ACTGGCAATG GGTGGTTACA CAGACGGATT TGATCTCCTG
ATTATTGCAG GAGTACTGGG AGAAGTACTT AAGGTCTTTA AACCTACACG GCTCGAGACT
GGACTCTTAG TTTCAACTTC TTTTCTAGGA TCAATTGTAG GGGCAATTAT CCTTGGGTTA
GTGTGTGACA TCATGGGTAG GAGAAAGAGC TACCTCATCT CGTTAATCCT TTTCATTATA
GGGGCTCTAA TTAGTGCCAC TGCACAGGAT TACGGCTCAC TTGTTCTTGG AAGGTTGTTG
GTAGGTCTAG GAATTGGAGG TGAAATTCCG TCCTCAACCA CCCTTCTAAC GGAGATTTCG
AAAAAATGGG TAGGTCTTAT CTTCGCCTCT TGGGCCATAG GAGCACTCAG TGCGACAATA
ATACCCTTTT TCGTATATCC CTGGAGGATT GCGTTGTTGC TAGGAGCGGT TCCACCGCTT
ATTGCCGTGG CCCTCCACAG GTGGATTAGG GAAAGCGAAG TTTGGCTCAA TTCGTCCAGG
ATTAATAACG CCTCGAAGTT TACAGTTAAT AAAGCCTCAA GTATAGCAAC CTTGGTCACC
GGGTTAAGTC AACTAGTCCT CACCATGGTC TTAGCATCGT TTGCTGTTTA TGTACCTGGA
TACTCCATGG GAACTCAGTT AATCAATTGG ACACTTTTCG CGATAGGTTC AGTCCTGACT
ATCTCGGCAC TCAGGAGAAA GCACATTCTT TTCCTTTCCT ACTTACTAAT AGGGGTGTTC
CTTGTTACAT ATTCCGTCAC CGGCTTGTTC AGTGCAATTG CCTTAGTCTG GTTCTTCTCG
TGTTTAGCCT TCGGATTCTC GTTCTTGTAC GTGGGAGAAC TTAGAAGCGC CACCGATAGA
GGAACCTTCA ATGGATTCCT CTTTTTTATG GGAAGGTTAG GAGGAGCCAT AGGTACGTTC
TCTTATCCAC TTCTGAGATA CGAGTTGAAA GAGGTGCTCC TAATGATTTC CCTTTCCCTT
ATGGTCCTAA GTCTTATCAT ACCATTTTTA GAAGAAACTA GGATAGAAAA GGTAGAGTGA
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| Protein sequence | MKRTLLALAM GGYTDGFDLL IIAGVLGEVL KVFKPTRLET GLLVSTSFLG SIVGAIILGL
VCDIMGRRKS YLISLILFII GALISATAQD YGSLVLGRLL VGLGIGGEIP SSTTLLTEIS
KKWVGLIFAS WAIGALSATI IPFFVYPWRI ALLLGAVPPL IAVALHRWIR ESEVWLNSSR
INNASKFTVN KASSIATLVT GLSQLVLTMV LASFAVYVPG YSMGTQLINW TLFAIGSVLT
ISALRRKHIL FLSYLLIGVF LVTYSVTGLF SAIALVWFFS CLAFGFSFLY VGELRSATDR
GTFNGFLFFM GRLGGAIGTF SYPLLRYELK EVLLMISLSL MVLSLIIPFL EETRIEKVE
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