| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_0460 |
|---|
| Symbol | |
|---|
| ID | 5105456 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Metallosphaera sedula DSM 5348 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009440 |
|---|
| Strand | + |
|---|
| Start bp | 414044 |
|---|
| End bp | 414703 |
|---|
| Gene Length | 660 bp |
|---|
| Protein Length | 219 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 640506366 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001190561 |
|---|
| Protein GI | 146303245 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 30 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAGAAAAG TTGATCCATT CGCGGTTTTC AAGAATCCCG TGTACAGAGT TAGAGTAATA
GCGGTGATGC TATCGATCTT CTTCTTCTAC TTCGGGGAGT ATCCCTATCT CACCGAGTAT
CCCCTATGGA CATCCTCTTT CCTTCACTAC TCCGGAGCCT TGGGTAACGA GATAACGTTC
CTGTTTGGAC TTGCTGGGAT TGCGACTTTC CTAGGGTCAA TAGGTCTTAG GTTTGTGGTG
GAAAGGGTGA GAAGGGCCGT TCTGGTCACC TTCTCCTATT TCGTAGGCAT GTTACTAGGG
GTCCTAATTG CCGTGGTTGG GGCAATAGCT AGGGATATTC CCTTAACCTT CCTAGGACTT
GTGCTCGCCA ATTTCATAGG CGTTGGATGG TCAAACCAGC TCAACTACTT AAATGGGACA
GAAAACGTCC CGACTTACGC CAGGGCAACG TCATTCGCCT TTTCCGACGG ATTCGCCCAT
CTCGGTGCTG CAATATCAAC GGCGATTATA TTCGACTTCA TACCAGTTCT AGGCAACGTT
CAGACTTGGG TTCTGTTCCA GGTTCCGATG GTAATCATGG GGTTAATACT GATTAAGGTT
CTGCCCAACA CCATTGGACG GAGCCTAGAG AGCGTCAATG AGGCCGAGGC AGGAACCTAA
|
|---|
| Protein sequence | MRKVDPFAVF KNPVYRVRVI AVMLSIFFFY FGEYPYLTEY PLWTSSFLHY SGALGNEITF
LFGLAGIATF LGSIGLRFVV ERVRRAVLVT FSYFVGMLLG VLIAVVGAIA RDIPLTFLGL
VLANFIGVGW SNQLNYLNGT ENVPTYARAT SFAFSDGFAH LGAAISTAII FDFIPVLGNV
QTWVLFQVPM VIMGLILIKV LPNTIGRSLE SVNEAEAGT
|
|---|
| |