| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_0439 |
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| Symbol | |
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| ID | 5105556 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Metallosphaera sedula DSM 5348 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009440 |
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| Strand | - |
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| Start bp | 390681 |
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| End bp | 391988 |
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| Gene Length | 1308 bp |
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| Protein Length | 435 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640506345 |
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| Product | deoxyribodipyrimidine photo-lyase type I |
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| Protein accession | YP_001190540 |
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| Protein GI | 146303224 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0415] Deoxyribodipyrimidine photolyase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCTGTG CCTTTGTGTT CAGGAGAGAC CTTAGGCTAG ATGACAACAC TTGCCTTCTG
AGAGCGCTTC AGGAATGCGA TGAAGTGGTT CCAGTATTCG TGTTGGATCC CAGGCAACTG
GGCGATAATC CATACAAGTC CGCCTTCGCC TTGGGCTTCA TGGTTGATTC CCTCCTGGAT
CTTGACATGC AGTTGAAGCA TCGTAGTTCA AGGCTCCACA TTCTGCAGGG ATATCCTGAG
AAGGTGTTGC CAGAGCTCAA GGTTGAGGCA ATATACTTCA ACGAAGATTA CACTCCTTTC
AGCCTGAACA GGGATAACGC AATAAGGGAG ACAATGCGTG GAAGGGTTAA GTCATGCGAA
GACCTTCTCC TGACACCAAA GGACTTCTTC GTAAGAAAGG GAAAACCCTA CACAGTTTTC
ACGCACTTTT ATAACGATGC GAGGAAGCTC GAGGTGAGGA AACCCATGAA GAACGACATG
AGGAATTACC TCACTCTCGA TCTCCCTGGG ACGGAGGTCC TGAAGCTGGA GGTCGAGAGG
GGTATCCCAG GCGGGAGACA GGAGGGGCTC AAGAGGCTGG AAAGGGCCAG AAACCTGAAC
TACTCCATGC GTAACTTCCC AGGAGTTGAA GGTACTACGA AGCTCTCGCC ATATATCAAG
TTTGGGGTTG TCTCACCGAG GGAGGTGTAC TGGGCGGTCA ACGAGGAGAT AAGGAGGCAA
CTGTACTGGA GGGACTTCTA CACGCTTCTG GCCTACTATA ATCCCCACGT GTTCGGTCAT
TCGTACAAGA GGGAGTACGA CTGTATACCC TGGAAGTGGA ATGAGGCTCA TCTTGAGGCA
TGGAAGCAGG GTAAGACGGG TTATCCCATA GTTGACGCGG GGATGAGGGA ACTTAACGAG
ACTGGATTCA TGCATAACAG AACCAGGATG ATAACGGCCT CATTTCTCGT GAAGGTATTG
CATGTGGATT GGAGGATAGG GGAGAGATAC TTCGCTACAA AACTAGTTGA CTACGACCCA
TCAGTAAATA ACGGAAATTG GCAATGGGTG GCCTCAACTG GTGCGGATTA CATGTTTAGG
GTATTCAACC CTTGGTTGCA ACAGAGGAAG TTTGACCCAG ATGCGGTGTA CATAAAGACG
TGGGTACCAG AACTGAAGGA TCTTCCAGCC GAGAAGATTC ACGAGATTTA TAGGTTCAAG
GTTTCAGGCT ATCCCTCCCC CATAGTGGAT TATAGTGAGG AAGTCAAGAA AGCTAGGAAG
ATGTACGAAG ACTCGGTGGC GTTATGCAGT AAGAGGGGTC TCTTTTAG
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| Protein sequence | MPCAFVFRRD LRLDDNTCLL RALQECDEVV PVFVLDPRQL GDNPYKSAFA LGFMVDSLLD
LDMQLKHRSS RLHILQGYPE KVLPELKVEA IYFNEDYTPF SLNRDNAIRE TMRGRVKSCE
DLLLTPKDFF VRKGKPYTVF THFYNDARKL EVRKPMKNDM RNYLTLDLPG TEVLKLEVER
GIPGGRQEGL KRLERARNLN YSMRNFPGVE GTTKLSPYIK FGVVSPREVY WAVNEEIRRQ
LYWRDFYTLL AYYNPHVFGH SYKREYDCIP WKWNEAHLEA WKQGKTGYPI VDAGMRELNE
TGFMHNRTRM ITASFLVKVL HVDWRIGERY FATKLVDYDP SVNNGNWQWV ASTGADYMFR
VFNPWLQQRK FDPDAVYIKT WVPELKDLPA EKIHEIYRFK VSGYPSPIVD YSEEVKKARK
MYEDSVALCS KRGLF
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