Gene Msed_0429 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMsed_0429 
Symbol 
ID5105546 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMetallosphaera sedula DSM 5348 
KingdomArchaea 
Replicon accessionNC_009440 
Strand
Start bp379876 
End bp380520 
Gene Length645 bp 
Protein Length214 aa 
Translation table11 
GC content49% 
IMG OID640506335 
Producthypothetical protein 
Protein accessionYP_001190530 
Protein GI146303214 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.880145 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTAAAGG TAATAGCTGC ACCTGGACCA GTTTCCTATC CCATGATAGC CTCTACAATG 
AAAAACAAGG ATATCATTAT TGATTTCGGA AAGGATGGTA GCGCTGACGT GATACTGGAC
TCCACAGTCT CCCTCGTGAG GAGAGGATTG AGGACAGACT ACGTAACGAT AAAGGGACTC
ATGGTAGTGT CGCCGGACGT GGGGAAGAGA ATTGGAGTCT GGAGGAAGGG AAGTGCTGCA
GATGTATTAA CGAGGGCCCT CCTAGACAAG AAGGGAATAA GGGGAGAAGT AGTATACGCC
GATGAGATGC CCAGGCTAGT AGAGATGCTG AACAAGAAGG AAGTAGACTC CATAGTGATT
GCCTCGCCCT TCGCTAAGGG AAAGACCTTC GAGGAGTTAC TTGGAATACC TGGAAGCTGT
GGAGCTAGCG TCAACGCCAA CCACGAGGAG TTCATCTCAG CCTACTCTGA GGGTATCGAG
CTCATGAAGC AGGACCCACA GGGGGTAGCG GAGTACGTGG CCAAGAAGTT ACCCATACAG
GCAAATCTAC AGATGATAGT TAACCTACCC AAGACCACCG TCCTGACCGT GGAGAGGCTA
AAGGACAATT CGCAGTTCGA GAACTTAGTC AAGAAGTATC TGTAA
 
Protein sequence
MLKVIAAPGP VSYPMIASTM KNKDIIIDFG KDGSADVILD STVSLVRRGL RTDYVTIKGL 
MVVSPDVGKR IGVWRKGSAA DVLTRALLDK KGIRGEVVYA DEMPRLVEML NKKEVDSIVI
ASPFAKGKTF EELLGIPGSC GASVNANHEE FISAYSEGIE LMKQDPQGVA EYVAKKLPIQ
ANLQMIVNLP KTTVLTVERL KDNSQFENLV KKYL