Gene Msed_0385 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMsed_0385 
Symbol 
ID5103628 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMetallosphaera sedula DSM 5348 
KingdomArchaea 
Replicon accessionNC_009440 
Strand
Start bp333059 
End bp333811 
Gene Length753 bp 
Protein Length250 aa 
Translation table11 
GC content51% 
IMG OID640506291 
Productenoyl-CoA hydratase 
Protein accessionYP_001190486 
Protein GI146303170 
COG category[I] Lipid transport and metabolism 
COG ID[COG1024] Enoyl-CoA hydratase/carnithine racemase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTCTAG TTCAGATTCG GGATCACGGA CCCGTCTCAG TCATATCACT CTCTAGACCC 
GATAAGCTCA ATGCCCTAAG CCTTGAACTT AGGTCTGAAC TCCTTGGATC CCTTAAACGA
TTCAATTCAG ACCCTGGGAA GCGCGTGGCA ATCCTCACGG GAGAAGGGAA GGCCTTCTCC
GTTGGCGCAG ATCTTGGCTC CATATCCTCT GACTTGACAG AGGACCTTAG GTCGTCCTTT
TACCCAATCC TCAGGGAAAT CAGGTTCTCG TCCAAGATCT ATATTTCAGC CGTCAACGGA
GTCACGGCAG GTGCAGGGAT AAGTTTGGCC CTAGCCTGCG ACGTAAGGAT AGCCTCACGG
GGATCTAGGT TTGTCACCGC CTTCCACAAC ATTGGGCTAG CACCTGACAC TGGGCTGACC
CTCATCCTAG CTAGGTTAGG CGGTACCAGA TTCCTGGACA GGCTTCTACT TGGAGGTGAG
ATTACGGCTG AAGAGCTAGA GAGGGAGGGC ATACTGAAGA TATCCGATGA TCCCTTGTCC
GAAGCCCTGA AATTGGGCGA GGAGATTTCC TCCGGACCCT TCAGGTCATA CGTAGCGTCC
AAGAAGCTGA TAAATAGAGC ACTATATCAC GACCTTGAAG AATACCTAGA ATACGAGTCA
GCGATGCAGG GTTACTTGGG AACCACGCAG GACTTTAAGG AGGGTGTAAA GGCCTTCCTC
GAGAAGAGGA AACCTAGTTT CAGGGGTGAA TGA
 
Protein sequence
MSLVQIRDHG PVSVISLSRP DKLNALSLEL RSELLGSLKR FNSDPGKRVA ILTGEGKAFS 
VGADLGSISS DLTEDLRSSF YPILREIRFS SKIYISAVNG VTAGAGISLA LACDVRIASR
GSRFVTAFHN IGLAPDTGLT LILARLGGTR FLDRLLLGGE ITAEELEREG ILKISDDPLS
EALKLGEEIS SGPFRSYVAS KKLINRALYH DLEEYLEYES AMQGYLGTTQ DFKEGVKAFL
EKRKPSFRGE