Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Msed_0383 |
Symbol | |
ID | 5103626 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Metallosphaera sedula DSM 5348 |
Kingdom | Archaea |
Replicon accession | NC_009440 |
Strand | - |
Start bp | 331213 |
End bp | 332220 |
Gene Length | 1008 bp |
Protein Length | 335 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 640506289 |
Product | hypothetical protein |
Protein accession | YP_001190484 |
Protein GI | 146303168 |
COG category | |
COG ID | |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCGAGA TTGATTACTC TCTAGATCCC GTTTATCCTG AACCCAATGT TTACCCTCCC AGATGGAACT TTGACAATGA GAAGGCCTGG CAACTCTACA GGAGAGCCAA AAGGGAGCAG TGGGATGAGG AGGATATTAA CTGGGATAGG GTCAGGGAAA TCGCCTCAGG GCTAGACAGG AAGCAGAGGC TGGCAATCGC TTATTGGTGG TCGCTCTTGT CCAACTTCGA CAACGCAACT CCCGTATTTG CCCACGCGGT AATCAAGGGG TTTGAGCACC ACCTGGACAC GGCGGTAAGG GGGATCCTGA CGACAATTAC CTATGACGAA AACAGACACA ACATGGTATG CGGTCTGGCA ATAGACTCCA TGATGAGAGG TTTTCCCTTC CAGTTCAAAC CTCAGGATGA CCTTGAAAGG AAGGCCATGT TAAACGTGGA GTGGACGTGG TATAATGGAG CTAGGTACTG GAAGGCTTAC CTAGAGGCTT ACAAGAAGTA CACGCTCGAC GTTCTCTTCA CCTCATTCAT GATGGGGGAG GCAGCGGCAA CCACAGTGTT CACCACGATG TCGCGTGGGG CGAAGCTCGA GGAGTTCTCC AAGGCTTTCC GTAATACCGC AGTTGATGAG ACGAGGCATT ACGCCTTCAC CCACTTGATC ATGACTCAGG GCGCCTCAAG AATGAACGAT GAGCAAAAGA GACTCGTAAC CAAGCAGGTC AGGGCAGGGT TCGTGTTCCT CTCCCTGATC ACGTATAGGC CACCAAAGGA GTTTTGGAAG TTACCCCCAT GGTTCGAGGA GGTCAACGAG AGGATGGAGG ACTTAGCTAG GAGTGCAGGG TTCCATATTC CTGACCTCAA GGAGAAGGAG GAGGCCTGGA GGACTGCAGT GATAAGGGTT GGGTCGACTC TAGCTAGGTA TGGGGTGAAG ATGCCTTCGT TCCCCGAACT TGGGATAACA GGGGAAGAGG TTGAGGTCTC GGAGGAGGAC TTCGTGCCCA TTTTTTAA
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Protein sequence | MSEIDYSLDP VYPEPNVYPP RWNFDNEKAW QLYRRAKREQ WDEEDINWDR VREIASGLDR KQRLAIAYWW SLLSNFDNAT PVFAHAVIKG FEHHLDTAVR GILTTITYDE NRHNMVCGLA IDSMMRGFPF QFKPQDDLER KAMLNVEWTW YNGARYWKAY LEAYKKYTLD VLFTSFMMGE AAATTVFTTM SRGAKLEEFS KAFRNTAVDE TRHYAFTHLI MTQGASRMND EQKRLVTKQV RAGFVFLSLI TYRPPKEFWK LPPWFEEVNE RMEDLARSAG FHIPDLKEKE EAWRTAVIRV GSTLARYGVK MPSFPELGIT GEEVEVSEED FVPIF
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