Gene Msed_0345 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMsed_0345 
SymbolfabG 
ID5105503 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMetallosphaera sedula DSM 5348 
KingdomArchaea 
Replicon accessionNC_009440 
Strand
Start bp300086 
End bp300832 
Gene Length747 bp 
Protein Length248 aa 
Translation table11 
GC content43% 
IMG OID640506251 
Product3-ketoacyl-(acyl-carrier-protein) reductase 
Protein accessionYP_001190446 
Protein GI146303130 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only 
COG ID[COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTATGCCC TAGTTACTGG AGGTTCAAGG GGTATAGGAA GGGAAATAGC TAAGACCTTC 
GTGAATGAAG GATATAAGGT TGCAATACTC TATCACGGCT CTGATGAAAA AGCTAAAGAA
TTGAAAGAAA AAGGAGTGCT TACTGTGAAA TGTGATGTGG GAGATCGATC TCAGGTGAGG
AAGGCTAGGG AAGAGCTCGA GAAAGATTTT CCCAGGTTGG ACGTGCTCGT GAACAATGCT
GGTATATGGT ATCTGATGCC CTTCGAGAAT TTCGATGAGG AAAAATACAA CGCCATGTTA
AAGGTTAATC TTAACGGGGT AATTTACGTC ACGTATGAAT TTCTATCTCT TCTTAAGAGG
TCGGAAAATG GATCGATTAT TAACATAGCC AGCAATGCAG GTATTGGGAC AGCCGCTGAG
GGAACAACTT TTTACGCCAT AACCAAAGCA GGGGTAATAA TCCTAACAAG GAGACTAGCG
TTCGAGTTAG GTAAATATAA CATAAGGGTT AACGCTGTGG CACCAGGCTG GATAGAGACT
GACATGACTC TAGGAGGGAA GACTCCTGAA GAGGCGGAGA AATTAAGGGA AACGTTCAGG
AATAAGACAG TTCTTCACAC CACAGGGAAG CCTGAGGACG TTGCTAACAT TGTTAGCTTC
TTAGCAAGCA AAAAGGCTAG ATATGTTACC GGACAAATTA TAGTGGCAGA TGGAGGAAGG
GTTGATAACT TAACCCACTC GCTATGA
 
Protein sequence
MYALVTGGSR GIGREIAKTF VNEGYKVAIL YHGSDEKAKE LKEKGVLTVK CDVGDRSQVR 
KAREELEKDF PRLDVLVNNA GIWYLMPFEN FDEEKYNAML KVNLNGVIYV TYEFLSLLKR
SENGSIINIA SNAGIGTAAE GTTFYAITKA GVIILTRRLA FELGKYNIRV NAVAPGWIET
DMTLGGKTPE EAEKLRETFR NKTVLHTTGK PEDVANIVSF LASKKARYVT GQIIVADGGR
VDNLTHSL