Gene Msed_0336 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMsed_0336 
Symbol 
ID5105494 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMetallosphaera sedula DSM 5348 
KingdomArchaea 
Replicon accessionNC_009440 
Strand
Start bp293131 
End bp293850 
Gene Length720 bp 
Protein Length239 aa 
Translation table11 
GC content49% 
IMG OID640506242 
Productenoyl-CoA hydratase/isomerase 
Protein accessionYP_001190437 
Protein GI146303121 
COG category[I] Lipid transport and metabolism 
COG ID[COG1024] Enoyl-CoA hydratase/carnithine racemase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGGTCC TCTACGAGGA AAGGGATGGA ATATCCTGGA TAACCTTCAA TAGACCTGAG 
AAACTCAACG CCTTAGATGC AGAGAGTTGG AAACTCCTGG GGGATCACGT GAGGCGTGGG
GATTCCTCCG ACTCGAGGGC TATCGTCATC ACTGGGAATG GGAGAGCCTT CAGCTCTGGG
GATGACATTG GGTCCATGAC CTCCCTTAAC GATCAAAGGG AGGCTGAGGA CTTCTTTAAC
GCGTTACTCT ACGCGGTGGA TGGGCTAATC TACACCAACA AACCCGTGAT AGGAGCAGTT
AACGGGTTAG CTTACGGTGG AGGGTGCGAG ATACTTCTCT TCATGGATGT CGTAATCTCA
ACTAGGTCAG CGAGATTCTC AATCCCCGAG GGAAGACTAG GCCTTATCCC TCCGATGGCA
TTATCCGTTG GATATAACTC GATTGGACGT TCAGTTGCAT GGCTAGCCAT CACAGGTGAG
GAGATAGATG CCATGAGGGC GAAGGAAATA GGCCTTGTTG ATATTGTGGG AGATGACCTC
AACCTAGAAC TGGAAAAGGT AATGGCCAGG ATTTCGTCCA TGGATCAAGG CTCCATAAAG
GTGATCAAGG CCTGGTTGAG AAAGAGTAGG GAACCGATCA GGGAAGCGAT TAGGGAACTG
TCCTTTATGT CACTATCGAC TCAAGCAAAG GAAAGGATGA AACGATTCCT TTCACGATAA
 
Protein sequence
MKVLYEERDG ISWITFNRPE KLNALDAESW KLLGDHVRRG DSSDSRAIVI TGNGRAFSSG 
DDIGSMTSLN DQREAEDFFN ALLYAVDGLI YTNKPVIGAV NGLAYGGGCE ILLFMDVVIS
TRSARFSIPE GRLGLIPPMA LSVGYNSIGR SVAWLAITGE EIDAMRAKEI GLVDIVGDDL
NLELEKVMAR ISSMDQGSIK VIKAWLRKSR EPIREAIREL SFMSLSTQAK ERMKRFLSR