| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_0276 |
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| Symbol | |
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| ID | 5103896 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Metallosphaera sedula DSM 5348 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009440 |
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| Strand | + |
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| Start bp | 234245 |
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| End bp | 235441 |
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| Gene Length | 1197 bp |
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| Protein Length | 398 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640506182 |
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| Product | acyl-CoA dehydrogenase domain-containing protein |
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| Protein accession | YP_001190377 |
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| Protein GI | 146303061 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1960] Acyl-CoA dehydrogenases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.0872822 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTGTTCC CGTTCAAGGG ACTTGAGGAT TTCAAAATAG ATCTAGACCA GGATCACGAA
CTCCTACGAA CAACCATAAG AGACTTCCTT GAGAGAGAGG TACAGAACAG GGTGGAGGAG
GGAGAAAGGA AGGGAGATCT GGGAGAGGTT AGGGAGAAGA TAAAGGAGCT AGGACTAAAT
GGACTAGACG TTCCGCAGGA GTATGGGGGA GCTGGTGGAG ATTACCTTTC ACTTCTCGTT
GCCACAGAGG AGATTAGCAG GATTTGGCCC TCCCTCTCCA CCTTCTTCTT GATAAATTGG
ATGTTCACCA GCGCACTGCT CCGATTTGGG GGGAAGGATA TCAAGGAGAG ATACGTGCCT
CCAGTTGCTA GGGGAGAAAA GATCGCGGCG TTTGCGAACA CTGAGCCTGG AGCTGGTACC
GACGTTGCTG GGATGTCCTC AGTAGCCAAG AAGGTTAACG GCGGTTATGT TCTGACAGGA
AAGAAGATAT TTATTACGAG TGGAGACCTT GCCGATTACA TTATTGTTAC CGCAAGGACT
TCCCCTCCAT CTGAGCAAAG GTGGAAGGGA ATCACCATGT TCGTCGTCGA GAGGGATTTC
CCAGGCTTCA AGGTTGAGAG CAGGATTGAT ACCACAGGAC TCAAGGCGTC TCATACAACT
GAGATTTCCT TCAATGAGGT TAAGGTACCT GAGGAGAACG TAGTTGGGGA GGTCGGACAG
GGATTCAAGT ACGCTGTCTC ATCCTTTGAC TACGCAAGGA CCATAGTTGC CTCTCAGGCC
CTGGGCATAG GTCAGGCTGC CCTCGAGAAG ATGGTGAGGT ACTCAATGGA CAGGAAAAGT
TTTGGACAGA GCATAGCAGG TTTTCAGATG GTTCAACAAA AGGTGTCAGA GTCCATGGCA
GACTTAACAA CCACGAGGCT GTTAGTTTAC TGGGCTGGCT CCCTTTACAA GAGGGGAATG
GAGAATGAGT ATATCATGGC CGCCTCCTTG GCCAAGTTCT TCGCTACAGA GGCGGCGGAA
AGAATAGTGT TAAGGGCCAT GACAGTTCAC GGCGGATACG GAGTCACCAC GTCTACGGGT
CTTGAGAGGA TGCTTAGGGA CATTCAGATT CTCAAGACCT ACGAGGGAAC CAACGACATT
CAGAGGGTCT CCGCAGCGAG ACACTTCTAC AGGAAGTTCA TGGGGCTAAA CGTATGA
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| Protein sequence | MVFPFKGLED FKIDLDQDHE LLRTTIRDFL EREVQNRVEE GERKGDLGEV REKIKELGLN
GLDVPQEYGG AGGDYLSLLV ATEEISRIWP SLSTFFLINW MFTSALLRFG GKDIKERYVP
PVARGEKIAA FANTEPGAGT DVAGMSSVAK KVNGGYVLTG KKIFITSGDL ADYIIVTART
SPPSEQRWKG ITMFVVERDF PGFKVESRID TTGLKASHTT EISFNEVKVP EENVVGEVGQ
GFKYAVSSFD YARTIVASQA LGIGQAALEK MVRYSMDRKS FGQSIAGFQM VQQKVSESMA
DLTTTRLLVY WAGSLYKRGM ENEYIMAASL AKFFATEAAE RIVLRAMTVH GGYGVTTSTG
LERMLRDIQI LKTYEGTNDI QRVSAARHFY RKFMGLNV
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