| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_0267 |
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| Symbol | |
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| ID | 5103887 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Metallosphaera sedula DSM 5348 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009440 |
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| Strand | - |
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| Start bp | 224544 |
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| End bp | 226370 |
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| Gene Length | 1827 bp |
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| Protein Length | 608 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 640506173 |
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| Product | AMP-dependent synthetase and ligase |
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| Protein accession | YP_001190368 |
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| Protein GI | 146303052 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0365] Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.0200095 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.25307 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGATATGGA AGCCTGACAA GGAATGGAGG GAAGAGAGCA ATATAGGGAA ATGGTTAGCT
GAAAGGAACC AGTCCCTGGA TCAGTTCCAG GAATTCACAT GGAAGGAACC TGAAACCTTT
TGGCCTTCCT TTCTAGAAAG AGTCGGGGTT AATTTCAGGA GGAAACCCGA GAAGGTTCTG
GACCTCTCTC GAGGAAGAGA ATGGTCCAAG TGGTTCGTAG GATCTAGGTT AAACGTTACA
GATCAGCTGG ATGATTCCCC TGAAACTCTG GTCTCTTCCA TGAATGAGGA GGGAGAAGTT
AAGGAGTTCA GTCGCTCCCA GGTCCTGAGC TGGGCTAAAT CCATATCCAG CTGGTTGAGG
AGAGCTGGGC TGTCCCCAGG GGATAGGGTG GCCGTGTACA TGCCCATGAC AGCTGAGATA
GTTCCCATTA TGCTGGGGAT AGCTAGGGCA GGGATGATTA TTGTCCCGCT ATTCTCAGGG
TATGGAGAGG AACCAATTCG AGTTAGGGTG GAGGATAGCG GAGCTAAGGC AATCTTCACT
GTAGATAGGT ACACAAGAAA GGGGAAACGG GTGGAACCGA CTAGGAACCT GGAGAGACTC
AATCTCGTAA AGATAGCCCT GAAAACTTCC CTAGAGCTAA AGGATTATCA CGACTTAAGG
GAGTTAACCA GGGAAGGAGG AGACGGATAC GAGGAAACTG AGGCGGAGAG TCCCCTAATG
ATAATTTACA CTTCAGGTAC CACCGGGAAA CCAAAGGGAT GTGTTCACGT TCACGGTGGC
TTTCCAGTGA AGGCGTCAGC GGACATGTAC TTCCATTTTG ACGTGAGGAA AGGAGAGGGT
GTTTCCTGGA TTTCAGACAT GGGATGGATG ATGGGACCGT GGTTAGTGTT TGGCTCTCTG
ATGGTGGGAG CGAGAATGGC TCTCCTCGAC GGTTACGCAA CCCCCGAAAC CCTGGAAAAC
TTCGTGAACA CCTTGAGGGT AAACGTCCTA GGTCTATCAG CCAGCCTAAT CAGGAGCTTG
AGGTCGTCTA AGCCGTCCAT GAAGCTGGAT GTGAGGGTCG TGGGGAACAC CGGTGAACCC
ATAGATCCTG AGAGCTGGAA CTGGATTGCC CAGGTTACGG AGTCCCCAGT GATTAATTAC
TCTGGTGGCA CGGAGATCTC CGGAGGAATA CTGGGGAACT ACGTTGTCAA GGAGATGAGG
CCCTCCTCCT TTAACGGGCA ATCTCCAGGA ATAAGGGCTG AGGTCTTCAA CGAGAGTGGC
GAACCTGCTA ATCCGGGCGA GGAGGGGGAG CTGGTGGTGC TGAGCGTTTG GCCCGGAATG
ACCAGGGGGT TCTGGAAGGA TCCAGGCAGG TACATTGAAA CCTACTGGTC TAGATGGAAA
AACGTTTGGG TTCACGGGGA TCTAGCCATA AAGGATGAGG ACGGTTACTT CTACATCGTG
GGAAGGAGCG ACGATACCAT AAAGGTCTCA GGGAAAAGGA TAGGTCCAGG GGAGATAGAG
GCAGTTCTCA ATGCCCATCG AGCTATCGTG GAGAGTGCAT GTGTTGGTGT CCCTGATCCT
ACGAAGGGAG AGAAGGTGAT ATGCCTAGCA GTACCTAAGG AGGTTAGGAC TGGACTCGAG
GAGGAGTTAC TGAAATACCT TGAGGAGAGG TTGGGGAAGG CAATAGCTCC CTCCATCGTG
AAACTAGTCC CTGAACTGCC AAAAACCAGG AACGCGAAGA TCATGAGGAG GCTCATAAGG
AACACGATAC TCAACAAAGA TCTAGGAGAT ATATCCTCCC TCGAAAATCC TCAGTCCCTA
GAGCTCATAA AAAAGGCGCT GTCTTGA
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| Protein sequence | MIWKPDKEWR EESNIGKWLA ERNQSLDQFQ EFTWKEPETF WPSFLERVGV NFRRKPEKVL
DLSRGREWSK WFVGSRLNVT DQLDDSPETL VSSMNEEGEV KEFSRSQVLS WAKSISSWLR
RAGLSPGDRV AVYMPMTAEI VPIMLGIARA GMIIVPLFSG YGEEPIRVRV EDSGAKAIFT
VDRYTRKGKR VEPTRNLERL NLVKIALKTS LELKDYHDLR ELTREGGDGY EETEAESPLM
IIYTSGTTGK PKGCVHVHGG FPVKASADMY FHFDVRKGEG VSWISDMGWM MGPWLVFGSL
MVGARMALLD GYATPETLEN FVNTLRVNVL GLSASLIRSL RSSKPSMKLD VRVVGNTGEP
IDPESWNWIA QVTESPVINY SGGTEISGGI LGNYVVKEMR PSSFNGQSPG IRAEVFNESG
EPANPGEEGE LVVLSVWPGM TRGFWKDPGR YIETYWSRWK NVWVHGDLAI KDEDGYFYIV
GRSDDTIKVS GKRIGPGEIE AVLNAHRAIV ESACVGVPDP TKGEKVICLA VPKEVRTGLE
EELLKYLEER LGKAIAPSIV KLVPELPKTR NAKIMRRLIR NTILNKDLGD ISSLENPQSL
ELIKKALS
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