| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_0205 |
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| Symbol | aspC |
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| ID | 5103949 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Metallosphaera sedula DSM 5348 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009440 |
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| Strand | + |
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| Start bp | 167802 |
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| End bp | 169091 |
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| Gene Length | 1290 bp |
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| Protein Length | 429 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640506110 |
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| Product | aspartyl-tRNA synthetase |
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| Protein accession | YP_001190306 |
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| Protein GI | 146302990 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0017] Aspartyl/asparaginyl-tRNA synthetases |
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| TIGRFAM ID | [TIGR00458] aspartyl-tRNA synthetase, archaeal type |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.398842 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.035256 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCTCCGGA CACACTTTAT CCAGGATGTA ACACCTGATC TGGATGGAAA GGAAGTTGTT
TTAGCGGGTT GGGTTCATAA CGTTAGGGAC TTAGGTGGAA AGAAGTTCAT TCTTCTCAGG
GATAAGAGCG GAATAGGACA GGTAGTAGTG GATAAGACAT CTCCTTCGTT TGAGGTCGCA
AAGGAGCTAA GTCAGGAATC AGCCATTCAG ATTAAGGGGA CAGTTAAGGC TGATAAGAGA
GCACCAAATG GAGTTGAGGT GTCCTGTAGC GAGCTGAGGA TCCTCAGTAA GGCTAAGGCT
CCTCTTCCGC TTGACGTCTC CGATAAGGTC AAAGCAGATA TAGAGGTCAG GCTTAAGGAG
AGGCTACTGG ACCTGAGAAG GCAGGAAATG CAGGCTATGA TAAGGATTCA ATCCACAGCT
GTGAGGACGT TCAGGGAGAC CCTCTACAAA CACGGGTTCT ACGAGATATT TACACCAAAG
ATTATAGCCA CGGGGACGGA GGGAGGTGCT CAACTCTTTC CCGTTATATA CTTCGGGAAG
GAGGCGTTCC TAGCTCAGAG CCCGCAGTTG TATAAGGAGC TGTTGGCTGG TGCCGTGGAG
AGGGTTTTTG AGGTTGCTCC AGCTTGGAGA GCCGAGGAGT CTGATACTCC CTATCACCTG
GCCGAGTTCA TTAGTATGGA CGTTGAGATG GCCTTCGCTG ATTACAACGA TGTAATGAAG
ATAGTTGAGG ATGTGATAGC CAACGTACTT GAGAACGTGG CGAGAAACCA TCAAAACGAT
CTGGCCATAC TTAATCATAG ACTCCCATCC ATCACCAGGC CCATTAAGAG AGTTACCTAC
GAGGAGGCAA TAGAGATACT CCAGTCCCAG GGTCTACCCA CGAAGTTTGG GGATGATATA
GGTACTCCAG AGTCGAGGGT ACTTAACAAG GTGCTGGAGC AGGATCTCTA CTTTATCACT
GACTGGCCAG CTGAAGCCCG TCCCTTCTAC ACTAAAAGGA GAGAGGATAA CCCCAAGATT
AGTGAGAGCT TCGACCTGGT TTATAGATGG CTTGAACTAG TGTCAGGGAG TAGCAGGAAC
CATACTAGGG AGGTTTTGGA GAGGGAGCTA AGGGCAAGGG GTCTCAATCC AATTAACTTT
GAGTTCTTCC TGAAGTGGTT CGACTACGGT ATTCCGCCTC ACGCCGGGTT TGGAATGGGA
CTTCAGAGAT TCATGTTAAT GCTTACCGGT CTTCAGAGCG TCAAGGAGGT ATCCTTGTTC
CCGAGGGACA AGAAGAGATT GGTCCCATGA
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| Protein sequence | MLRTHFIQDV TPDLDGKEVV LAGWVHNVRD LGGKKFILLR DKSGIGQVVV DKTSPSFEVA
KELSQESAIQ IKGTVKADKR APNGVEVSCS ELRILSKAKA PLPLDVSDKV KADIEVRLKE
RLLDLRRQEM QAMIRIQSTA VRTFRETLYK HGFYEIFTPK IIATGTEGGA QLFPVIYFGK
EAFLAQSPQL YKELLAGAVE RVFEVAPAWR AEESDTPYHL AEFISMDVEM AFADYNDVMK
IVEDVIANVL ENVARNHQND LAILNHRLPS ITRPIKRVTY EEAIEILQSQ GLPTKFGDDI
GTPESRVLNK VLEQDLYFIT DWPAEARPFY TKRREDNPKI SESFDLVYRW LELVSGSSRN
HTREVLEREL RARGLNPINF EFFLKWFDYG IPPHAGFGMG LQRFMLMLTG LQSVKEVSLF
PRDKKRLVP
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