| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_0197 |
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| Symbol | |
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| ID | 5103941 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Metallosphaera sedula DSM 5348 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009440 |
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| Strand | - |
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| Start bp | 160511 |
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| End bp | 161419 |
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| Gene Length | 909 bp |
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| Protein Length | 302 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640506102 |
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| Product | adenosylcobinamide-phosphate synthase |
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| Protein accession | YP_001190298 |
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| Protein GI | 146302982 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG1270] Cobalamin biosynthesis protein CobD/CbiB |
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| TIGRFAM ID | [TIGR00380] cobalamin biosynthesis protein CobD |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.0669061 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCTACCCA TTCTCATTGC CTCACTTGCT TTAGACCTAG TGATGGGTGA GCCACCTACC
TTCATACACC CTGTGGTGTA TGTTGGGAGG ATATCGGAGA AGCTGATAAG GCCATTCAAG
GGAAAAGTCT ACGGAGTAAT TCTGTGGCTA GCCTCGGTAA TCCCAGTCCT TCTACTGTGC
CTGACGCCCC TGTATTTACC CAGGTTAATA GAGGCAATCC TGCTTGTTCT CGTTCTGAAA
ACCACCTTCT CGATCAGGAT GTTATACATG ATTGTGAGAT CGTCTATTCC CTTGAGGGAG
GAATCTAGAA GGATTGTGCA GAACATAGTC AGAAGGGATT TGAGAGAGGT CTCCTTGGGT
CACGTAGCAT CGGCGTCCAT AGAGTCTCTC TTTGAGAGCC TTGTTGACGG GATAACTTCC
CCCCTGTTCT GGTTTCTCTT GCTTGGGCTT CCTGGAGCCT TACTTCAAAG GTTTGCCAAT
ACCATGGATA GCATGGTTGG GTATAAGACC CCAGACCTGA TTAATGAGGG GTACTTCTCA
GCAAGGATGG ACACTGCTCT AAACTACGTT CCTGCGAGAT TGACCGGACT AATGATGCTA
CTTGCCGGTC TTCTCCTGGG ACTGAACGTG AGAAACGCAA TTGTCACCCT ACGCAACACT
AAGATGGAGA GTCCCAACGC TAGGTACCCT ATAGCTATAG CAGCTGGCCT CCTCGAGGTC
AGACTCGAAA AGATAAATGC CTACTCTGCA GGTTCAGGGA ACCTTCCAGA CTCTAGGGAC
GTGGAGAGAG CCTTAGCCTT GTTTAGGCTT ACCTTGCTTC TCTATCTCCT TTTCATTTTA
ACTAGTTATT ACTACCTTTA TGGCGTTTCC TTGTTTGGCT ACCCTTACGG CCTCGTGGAA
CTGCTCTAG
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| Protein sequence | MLPILIASLA LDLVMGEPPT FIHPVVYVGR ISEKLIRPFK GKVYGVILWL ASVIPVLLLC
LTPLYLPRLI EAILLVLVLK TTFSIRMLYM IVRSSIPLRE ESRRIVQNIV RRDLREVSLG
HVASASIESL FESLVDGITS PLFWFLLLGL PGALLQRFAN TMDSMVGYKT PDLINEGYFS
ARMDTALNYV PARLTGLMML LAGLLLGLNV RNAIVTLRNT KMESPNARYP IAIAAGLLEV
RLEKINAYSA GSGNLPDSRD VERALALFRL TLLLYLLFIL TSYYYLYGVS LFGYPYGLVE
LL
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