| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_0179 |
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| Symbol | |
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| ID | 5103923 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Metallosphaera sedula DSM 5348 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009440 |
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| Strand | + |
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| Start bp | 143957 |
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| End bp | 145060 |
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| Gene Length | 1104 bp |
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| Protein Length | 367 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640506084 |
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| Product | ABC transporter related |
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| Protein accession | YP_001190280 |
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| Protein GI | 146302964 |
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| COG category | [P] Inorganic ion transport and metabolism
[V] Defense mechanisms |
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| COG ID | [COG1122] ABC-type cobalt transport system, ATPase component
[COG1136] ABC-type antimicrobial peptide transport system, ATPase component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.732019 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.13426 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGCTTGTCA TTACTCATCC CTATCTCCCT GGTAAAGTAG AGCTGGAAAG GGACGAGATA
GTAGGACTGG TGGGAAGGAA TGGGAGCGGT AAGACTACCC TGATCAACTC CATTCTGTGT
CAGAAGCACA ATGTGTTCCT GGACGAGCAA GATTTCTGTG AGAGAAAGGA TTACTCGCTG
GTCTCCGCCG TATTCCAAGA CCCAAGTTCC CAAATTCTGG CCACCACCCT TGAAGATGAG
CTTAGACTAA TGTCCCATTT TCATCATGTG AATTTTGAGA TCGGGAAGAG GTTAATGGGT
CCCTACTTCT CCACGGATTT CTTCAAGTTG TCCGATGGAT ATAGGAAAAG GTTTGTGATA
TCCTCGGTGC TCTCCTACGG ACCTGAGTAC CTGCTAATCG ACGAGCCACT ATCTAACCTC
GACGACGAGG GAATCAAACT TGTCCTAGGC TCAATACCAA AGGGAAGTTT AATATCAGAA
CATAGGACTA AACATCTCCT CAACCTCGTT CAAAGAGTTT ACCTCCTGTC AGGAGACGTG
CGAGAGGTTG ACAAGGAGAA GCTGGAGGAC CAGGAATTCT TGAGGAGGAA CGGACTCAGG
GGGTTTCAGA TAGAGTATCA AAGAGGGTCA CCAGGATCCG AGATTCTAGA CGTTCAAGTG
GGGCTGAGGT TGAAGGTAAG AGAGGGAGAG GTAGTCTGTT TAATAGGTAA GAACGGTGTC
GGAAAGACCA CCATACTCAG GAAACTCTCC AAGAAGATCT ACTCGGTCTT TCAGAACCTT
GATTTGCAGT TCTTTTACGA GACCGTGGCT GATGAAGTGG GTAACGATGA CGCGCTTTCC
CTTTTCGGTC TCACTGAACT GAGGGAGAGA AGCCCCTTTA CGCTTAGCCT AGGTCAGAAG
ATGAGGGTGC TTATAGCCTC AGCCTACGCT TCAGGTTACA AGGTCATAGG ACTGGACGAG
CCTACCACGG CCATGGACGG TGACGGATTA CAAAATTTTG TGAAAATGGT CGAACTTTTA
AGGGAGGAAA GGAGAGGTTT AATTTTGGCT ACTCATGACA AGGACGTTAT TCCCATCTGC
GACCAAATAA TCTCTTTAAG TTGA
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| Protein sequence | MLVITHPYLP GKVELERDEI VGLVGRNGSG KTTLINSILC QKHNVFLDEQ DFCERKDYSL
VSAVFQDPSS QILATTLEDE LRLMSHFHHV NFEIGKRLMG PYFSTDFFKL SDGYRKRFVI
SSVLSYGPEY LLIDEPLSNL DDEGIKLVLG SIPKGSLISE HRTKHLLNLV QRVYLLSGDV
REVDKEKLED QEFLRRNGLR GFQIEYQRGS PGSEILDVQV GLRLKVREGE VVCLIGKNGV
GKTTILRKLS KKIYSVFQNL DLQFFYETVA DEVGNDDALS LFGLTELRER SPFTLSLGQK
MRVLIASAYA SGYKVIGLDE PTTAMDGDGL QNFVKMVELL REERRGLILA THDKDVIPIC
DQIISLS
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