Gene Msed_0165 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMsed_0165 
Symbol 
ID5104954 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMetallosphaera sedula DSM 5348 
KingdomArchaea 
Replicon accessionNC_009440 
Strand
Start bp134115 
End bp134903 
Gene Length789 bp 
Protein Length262 aa 
Translation table11 
GC content45% 
IMG OID640506068 
Productacetylglutamate/acetylaminoadipate kinase 
Protein accessionYP_001190266 
Protein GI146302950 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0548] Acetylglutamate kinase 
TIGRFAM ID[TIGR00761] acetylglutamate kinase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000418144 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.192381 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTGTAG TAAAGATAGG AGGGAGGGTA GTGAAGAACG CCCTCCAGAA CGTTATAGAG 
AGCGTTCTAA GATACCCGGG AAAATTGATA CTAGTCCATG GAGGTGGAGA CATTGTCAGC
GAGTATACGA AGCGCATGGG CATGGAGCCC ACATTTGTTA CATCACCTGA GGGCATAAGG
AGTAGGTATA CTAGTAAGGA AGAGTTAGAC ATTTACGTTA TGACCATGGG CTTGATCAAC
AAGAACATTG TCACGCAACT AATTAGCAAG GGGAAGACAG CAATTGGTAT TACTGGAGTA
GACGGTGGGT CTGTTATTGG GACAAGAAAG AAAAGGATCA TGATCTTAGA CGAAAGAGGA
AAGAAGAGGA TAATAGACGG TGGCTATACG GGGAAAATAG TTTCAGTTAA TTCTCAACTT
ATATCTTCCT TAACGTCTTT AGTTGATGTA ATAGTGATTT CACCGATAGC TCTAGATACG
GAGGAGAGTA CTCCTTTGAA TGTAGACGGT GATCAAATGG CCTTTAACGT GGCTAGGGCT
GTCAAAGCGG AGGCCCTTCT ACTCCTGTCA GATGTGGATG GTGTGCTTCT AAACAACGCC
GTTGTGAAGA AACTTAGTAA GGAGGAGGCA AAGGAGCTAG CCACAAAGAT TGGGCCCGGG
ATGAACAGGA AAGTTCTCAT GGCTGCCGAG AGTGTGGAGT CGGGAGTTAG TAAGGTAATA
ATAGGCTCGG GCTTAGTTCC TGATGCAATA AATTCCGCTT TGGCAGGAAG GGGGACTGAG
ATCTCATGA
 
Protein sequence
MIVVKIGGRV VKNALQNVIE SVLRYPGKLI LVHGGGDIVS EYTKRMGMEP TFVTSPEGIR 
SRYTSKEELD IYVMTMGLIN KNIVTQLISK GKTAIGITGV DGGSVIGTRK KRIMILDERG
KKRIIDGGYT GKIVSVNSQL ISSLTSLVDV IVISPIALDT EESTPLNVDG DQMAFNVARA
VKAEALLLLS DVDGVLLNNA VVKKLSKEEA KELATKIGPG MNRKVLMAAE SVESGVSKVI
IGSGLVPDAI NSALAGRGTE IS