Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Msed_0165 |
Symbol | |
ID | 5104954 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Metallosphaera sedula DSM 5348 |
Kingdom | Archaea |
Replicon accession | NC_009440 |
Strand | + |
Start bp | 134115 |
End bp | 134903 |
Gene Length | 789 bp |
Protein Length | 262 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 640506068 |
Product | acetylglutamate/acetylaminoadipate kinase |
Protein accession | YP_001190266 |
Protein GI | 146302950 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0548] Acetylglutamate kinase |
TIGRFAM ID | [TIGR00761] acetylglutamate kinase |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.000418144 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.192381 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATTGTAG TAAAGATAGG AGGGAGGGTA GTGAAGAACG CCCTCCAGAA CGTTATAGAG AGCGTTCTAA GATACCCGGG AAAATTGATA CTAGTCCATG GAGGTGGAGA CATTGTCAGC GAGTATACGA AGCGCATGGG CATGGAGCCC ACATTTGTTA CATCACCTGA GGGCATAAGG AGTAGGTATA CTAGTAAGGA AGAGTTAGAC ATTTACGTTA TGACCATGGG CTTGATCAAC AAGAACATTG TCACGCAACT AATTAGCAAG GGGAAGACAG CAATTGGTAT TACTGGAGTA GACGGTGGGT CTGTTATTGG GACAAGAAAG AAAAGGATCA TGATCTTAGA CGAAAGAGGA AAGAAGAGGA TAATAGACGG TGGCTATACG GGGAAAATAG TTTCAGTTAA TTCTCAACTT ATATCTTCCT TAACGTCTTT AGTTGATGTA ATAGTGATTT CACCGATAGC TCTAGATACG GAGGAGAGTA CTCCTTTGAA TGTAGACGGT GATCAAATGG CCTTTAACGT GGCTAGGGCT GTCAAAGCGG AGGCCCTTCT ACTCCTGTCA GATGTGGATG GTGTGCTTCT AAACAACGCC GTTGTGAAGA AACTTAGTAA GGAGGAGGCA AAGGAGCTAG CCACAAAGAT TGGGCCCGGG ATGAACAGGA AAGTTCTCAT GGCTGCCGAG AGTGTGGAGT CGGGAGTTAG TAAGGTAATA ATAGGCTCGG GCTTAGTTCC TGATGCAATA AATTCCGCTT TGGCAGGAAG GGGGACTGAG ATCTCATGA
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Protein sequence | MIVVKIGGRV VKNALQNVIE SVLRYPGKLI LVHGGGDIVS EYTKRMGMEP TFVTSPEGIR SRYTSKEELD IYVMTMGLIN KNIVTQLISK GKTAIGITGV DGGSVIGTRK KRIMILDERG KKRIIDGGYT GKIVSVNSQL ISSLTSLVDV IVISPIALDT EESTPLNVDG DQMAFNVARA VKAEALLLLS DVDGVLLNNA VVKKLSKEEA KELATKIGPG MNRKVLMAAE SVESGVSKVI IGSGLVPDAI NSALAGRGTE IS
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