| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_0148 |
|---|
| Symbol | |
|---|
| ID | 5105001 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Metallosphaera sedula DSM 5348 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009440 |
|---|
| Strand | + |
|---|
| Start bp | 119670 |
|---|
| End bp | 120173 |
|---|
| Gene Length | 504 bp |
|---|
| Protein Length | 167 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 640506051 |
|---|
| Product | biotin/lipoyl attachment domain-containing protein |
|---|
| Protein accession | YP_001190249 |
|---|
| Protein GI | 146302933 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1038] Pyruvate carboxylase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 6 |
|---|
| Fosmid unclonability p-value | 0.00853236 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGAAACTGT ATAGGGTTCA TGCGGATACA GGAGATACCT TCATTGTGGC CCACGATCAA
AAGGAAAACA AGGACAGACT AAAGACGGAA AATAACGAGT TTGAGATAGA GTATGTCGGT
CAGGGTACAA GGGAAGGAGA AATAATCCTG AAGATTAACG GTGAGATGCA CAGGGTCTTC
ATAGACAACG GATGGATAAT TCTTGACAAT GCAAGGATAT TCAGGGCAGA GAGAGTTACA
GAGCTTCCCA CTCAGGAAGG ACAGACACTG GACGAGATGA TCAAAGGTAA GGAGGGAGAA
GTGCTATCAC CGCTTCAGGG CAGAGTAGTT CAGGTCAGGG TTAAGGAAGG CGATGCGGTG
AATAAGGGAC AGCCCTTGCT ATCGATTGAG GCCATGAAAT CTGAGACCAT AGTGTCGGCA
CCAATAAGCG GGCTAGTGGA GAAGGTATTA GTTAAGGCAG GTCAAGGAGT AAAGAAGGGA
GATATCCTAG TGGTGATAAA GTAA
|
|---|
| Protein sequence | MKLYRVHADT GDTFIVAHDQ KENKDRLKTE NNEFEIEYVG QGTREGEIIL KINGEMHRVF
IDNGWIILDN ARIFRAERVT ELPTQEGQTL DEMIKGKEGE VLSPLQGRVV QVRVKEGDAV
NKGQPLLSIE AMKSETIVSA PISGLVEKVL VKAGQGVKKG DILVVIK
|
|---|
| |