| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_0068 |
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| Symbol | |
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| ID | 5104646 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Metallosphaera sedula DSM 5348 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009440 |
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| Strand | + |
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| Start bp | 62802 |
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| End bp | 64016 |
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| Gene Length | 1215 bp |
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| Protein Length | 404 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640505967 |
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| Product | nucleotidyl transferase |
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| Protein accession | YP_001190169 |
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| Protein GI | 146302853 |
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| COG category | [J] Translation, ribosomal structure and biogenesis
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1208] Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B, gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.0170821 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.011821 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGAAAGTAG TGCTCCTGGC AGCGGGTAAA GGAGAAAGAC TGGAACCCAT TACCCATACC
AGGCCTAAGC CCTTTGTTCC CGTTCTCGGC GAAACCCTTA TTGAGAGGAA TTTAAGGATT
GTCAAGGATA TTGTGAAAGA TCCTGATATT TTTGTAGTAA TCCCTGAGGA GTATCCTCGC
GAGTATGAGA ATTTCTTTTC GCGATTGCAG GGAGTAAGGC TCGTGAAACA GGGCGAAAGA
AAGGGAACGG GAGGCGCTCT TCAGTATATT CCTAAATTCT CCGATGACGA GGTTGTCATT
TTTTACGGTG ACGTATACAC CACTAGGAAC TCCGTGGAGA GGTTGATATC TGAGCCAGGT
AATGCCATGC TTGGTATTGA AGTTCCCAAT CCCAGCGAAT ACGGATCTCT TCAAATTGAT
GGGGAAGGGA ACCTTCGAGG AATCGTGGAG AAAAGTCCTA ACCCACCCTC TAAGGTGATT
AATGGAGGAA TCTATAAGCT GTCATCGTCA ATCTTAGATT TGGTGGACTC CCTGGAGATC
TCTCCCAGGG GAGAGTATGA GTTTACTGAC GCTCTTACGG CCTTCGCCAA GACACATAAG
GTAAAGGTGG TTAAGAGCAA TGATTTCTGG AGGGATGTGG GAAAGCCCTG GGATGTCATT
GACATAAATA AGGCTGAACT GGACTCAATT CCAGGTAGAA TAGAAGGGGA ATTGGAGGAA
AATGTTAAGA TAGTAGGAAA AGTGATCATT GAAGAGGGAG CTAAGGTCCT ATCTGGTACA
AGGATAGAGG GACCTGTATT CATAGGTAAG AACTGTGTAG TGGGACCTAA TGCCTATCTA
AGGCCCTACA CCCTTCTCAC TGGTAACGTG AAGATAGGGT CATTCGTGGA GATTAAGGAA
TCGGTAGTAA TGGAGGGGAC AAAGATTCCT CACCTGAGTT ACGTTGGGGA TAGCGTGATC
TCAGAGGACG TTAATTTTGG GGCCGGTACA TTAGTGGCGA ACTTAAGGTT TGATGAGAAG
GAGGTCTTCA TGAATATTAA GGGAAAGAGA CAGGGAACTG GCAGGAAAAA GATGGGAACT
GTAGTGGGGG GACATGTAAG AACAGGGATA AACGTGTCCA TTCTGCCTGG AATAAAGATC
GGGGCTTACG CCATGATTTA TCCAGGAGCA GTGGTAAACA GGGACGTGAA CAGGGGAGAA
TTCTATAAGG GGTAG
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| Protein sequence | MKVVLLAAGK GERLEPITHT RPKPFVPVLG ETLIERNLRI VKDIVKDPDI FVVIPEEYPR
EYENFFSRLQ GVRLVKQGER KGTGGALQYI PKFSDDEVVI FYGDVYTTRN SVERLISEPG
NAMLGIEVPN PSEYGSLQID GEGNLRGIVE KSPNPPSKVI NGGIYKLSSS ILDLVDSLEI
SPRGEYEFTD ALTAFAKTHK VKVVKSNDFW RDVGKPWDVI DINKAELDSI PGRIEGELEE
NVKIVGKVII EEGAKVLSGT RIEGPVFIGK NCVVGPNAYL RPYTLLTGNV KIGSFVEIKE
SVVMEGTKIP HLSYVGDSVI SEDVNFGAGT LVANLRFDEK EVFMNIKGKR QGTGRKKMGT
VVGGHVRTGI NVSILPGIKI GAYAMIYPGA VVNRDVNRGE FYKG
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