Gene Mrub_2292 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMrub_2292 
Symbol 
ID8880401 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMeiothermus ruber DSM 1279 
KingdomBacteria 
Replicon accessionNC_013946 
Strand
Start bp2345478 
End bp2346164 
Gene Length687 bp 
Protein Length228 aa 
Translation table11 
GC content65% 
IMG OID 
ProductHAD-superfamily hydrolase subfamily IA, variant 3 
Protein accessionYP_003508063 
Protein GI291296665 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.138759 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.0114246 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTCGCG CGGTGCTGTT CGACGTGGGC GATACGCTTA TTCTAGGACA CCCCAAATAC 
TGGCTATGGC CCATCCTGCA GGCCAAGGGC ATCGCTCACC AGGCCGACCT AAAGCGCCTG
CCCCAGGCCA TTCAGGACGC CTACAAGCAC TACTCCGACC ACCACATGGA CGCCACCGAC
GAGGCCACCG CCCTCTCGTT TTGGCGGGCT TTTCACTGGG AGGTGATGAA CGGTATCGGG
CTGGGGGCCT ACGCCGACGA GGTGGCCGAC TACCTGAAAG AACACTGGCA GAGCCCCCAC
ATCTGGCCGC TCACGCCGGG GGCCAAAGAG GTGCTGGGCG AGCTGAAAAG CCTGGGCTTC
AAGCTGGGGG TGGTTTCCAA CTGGGACTGG ACGCTGCCGG GGGTTTTGCA GGCCACGGGC
CTGGCCGACT TCTTCGACTA CGTGGGGGTC TCGGCGCTGG AGGGGGTGGC CAAGCCCGAC
CCACGGTTTT TCCAGATCGT GCTGGGCCAT CTGGGCGTGG AGCCGCAGCA AGCGATTCAC
GTGGGCGACT CGGAGGACGA TATCGCCGGG GCCAAAGCCG CCGGGGTTCG GCCCATCCTG
TTCGACCCGT ACCGGCAGAA CCCCAATGCC GTGGGCGATC TGGCTAGGGT GATTGAGTAC
GCTACGGGCC GGGTGAACGG GGGGTAG
 
Protein sequence
MIRAVLFDVG DTLILGHPKY WLWPILQAKG IAHQADLKRL PQAIQDAYKH YSDHHMDATD 
EATALSFWRA FHWEVMNGIG LGAYADEVAD YLKEHWQSPH IWPLTPGAKE VLGELKSLGF
KLGVVSNWDW TLPGVLQATG LADFFDYVGV SALEGVAKPD PRFFQIVLGH LGVEPQQAIH
VGDSEDDIAG AKAAGVRPIL FDPYRQNPNA VGDLARVIEY ATGRVNGG