Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mrub_2088 |
Symbol | |
ID | 8880197 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Meiothermus ruber DSM 1279 |
Kingdom | Bacteria |
Replicon accession | NC_013946 |
Strand | - |
Start bp | 2128638 |
End bp | 2129486 |
Gene Length | 849 bp |
Protein Length | 282 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | |
Product | binding-protein-dependent transport systems inner membrane component |
Protein accession | YP_003507862 |
Protein GI | 291296464 |
COG category | |
COG ID | |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.00655693 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 0.897951 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAGGACTA AAGGTCTGGG TTATTACGCT GGAAGGGTGC TGTTTTATGC GCTGGTGGTC TTTATCGTGG TCTACAGCGT GTTTCCTTTT TACTGGGCGG TAATTAGCAG CTTCAAAACC AGCGATGCGC TGTTTAGTTC GAACCCAAGC TTTTTGCCAG TGCCCTTTAC CCTTACGCAT TACCAGAACG TCTTTAGCGG GGCGGAGTTT GGCCGCAACC TGCTCAACTC GCTGATTGTG GCAGGGGGGG CCACCCTGAT CTGCCTGGTG CTGGGGGTGA TGGCGGCTTA CGCGCTGGGT CGGCTGCGCT TTCCTCCCAA GAATGCGGTG CTGTACCTGG TGCTGGCCAT GACCATGTTC CCCCAGGTGT CGGTGCTCTC GGGGATGTTT GTGCTGCTGC GGGAGACGGG TTTGTTTAAT ACCCATGCGG GTCTGATTCT GTCGTATATG CTCTTCACCC TGCCCTTTAC CGTGTGGGTG CTGACCGGCT ACTTTCGGGG GCTGCCGCGG GAGCTCGAGG AGGCCGCCTA CGTGGACGGG GCCACGCCCA TGCAAACCCT GATCAAGGTC ATGCTGCCCC TCACCGGCCC TGGTCTGGTG ACCACCGGCC TGCTGGCCTT TATCGCCGCC TGGAACGAGT ACCTCTTCGC CCTGACCTTT ACCATTGGTA ACAACGTGCG CACCGTGCCG GTGGCCATTG CCTCGTTTGG TGGGGCCACC CCCTTTGAGA TTCCCTGGGG TTCGATTATG GCGGCCTCGG TGGTGGTGAC GGTGCCGCTG GTGATCCTGG TGCTGATCTT CCAGCAGCGC ATCGTGGCCG GGCTGACTGC GGGGGCTGTG AAAGGCTGA
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Protein sequence | MRTKGLGYYA GRVLFYALVV FIVVYSVFPF YWAVISSFKT SDALFSSNPS FLPVPFTLTH YQNVFSGAEF GRNLLNSLIV AGGATLICLV LGVMAAYALG RLRFPPKNAV LYLVLAMTMF PQVSVLSGMF VLLRETGLFN THAGLILSYM LFTLPFTVWV LTGYFRGLPR ELEEAAYVDG ATPMQTLIKV MLPLTGPGLV TTGLLAFIAA WNEYLFALTF TIGNNVRTVP VAIASFGGAT PFEIPWGSIM AASVVVTVPL VILVLIFQQR IVAGLTAGAV KG
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