Gene Mrub_2088 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMrub_2088 
Symbol 
ID8880197 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMeiothermus ruber DSM 1279 
KingdomBacteria 
Replicon accessionNC_013946 
Strand
Start bp2128638 
End bp2129486 
Gene Length849 bp 
Protein Length282 aa 
Translation table11 
GC content60% 
IMG OID 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_003507862 
Protein GI291296464 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.00655693 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.897951 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGGACTA AAGGTCTGGG TTATTACGCT GGAAGGGTGC TGTTTTATGC GCTGGTGGTC 
TTTATCGTGG TCTACAGCGT GTTTCCTTTT TACTGGGCGG TAATTAGCAG CTTCAAAACC
AGCGATGCGC TGTTTAGTTC GAACCCAAGC TTTTTGCCAG TGCCCTTTAC CCTTACGCAT
TACCAGAACG TCTTTAGCGG GGCGGAGTTT GGCCGCAACC TGCTCAACTC GCTGATTGTG
GCAGGGGGGG CCACCCTGAT CTGCCTGGTG CTGGGGGTGA TGGCGGCTTA CGCGCTGGGT
CGGCTGCGCT TTCCTCCCAA GAATGCGGTG CTGTACCTGG TGCTGGCCAT GACCATGTTC
CCCCAGGTGT CGGTGCTCTC GGGGATGTTT GTGCTGCTGC GGGAGACGGG TTTGTTTAAT
ACCCATGCGG GTCTGATTCT GTCGTATATG CTCTTCACCC TGCCCTTTAC CGTGTGGGTG
CTGACCGGCT ACTTTCGGGG GCTGCCGCGG GAGCTCGAGG AGGCCGCCTA CGTGGACGGG
GCCACGCCCA TGCAAACCCT GATCAAGGTC ATGCTGCCCC TCACCGGCCC TGGTCTGGTG
ACCACCGGCC TGCTGGCCTT TATCGCCGCC TGGAACGAGT ACCTCTTCGC CCTGACCTTT
ACCATTGGTA ACAACGTGCG CACCGTGCCG GTGGCCATTG CCTCGTTTGG TGGGGCCACC
CCCTTTGAGA TTCCCTGGGG TTCGATTATG GCGGCCTCGG TGGTGGTGAC GGTGCCGCTG
GTGATCCTGG TGCTGATCTT CCAGCAGCGC ATCGTGGCCG GGCTGACTGC GGGGGCTGTG
AAAGGCTGA
 
Protein sequence
MRTKGLGYYA GRVLFYALVV FIVVYSVFPF YWAVISSFKT SDALFSSNPS FLPVPFTLTH 
YQNVFSGAEF GRNLLNSLIV AGGATLICLV LGVMAAYALG RLRFPPKNAV LYLVLAMTMF
PQVSVLSGMF VLLRETGLFN THAGLILSYM LFTLPFTVWV LTGYFRGLPR ELEEAAYVDG
ATPMQTLIKV MLPLTGPGLV TTGLLAFIAA WNEYLFALTF TIGNNVRTVP VAIASFGGAT
PFEIPWGSIM AASVVVTVPL VILVLIFQQR IVAGLTAGAV KG