| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mrub_1946 |
|---|
| Symbol | |
|---|
| ID | 8880055 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Meiothermus ruber DSM 1279 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013946 |
|---|
| Strand | - |
|---|
| Start bp | 2004665 |
|---|
| End bp | 2005279 |
|---|
| Gene Length | 615 bp |
|---|
| Protein Length | 204 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003507722 |
|---|
| Protein GI | 291296324 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.000156173 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGCCGGGCT CGGAGATTGA TCTGGTTCCA GTGCGCCTCT ACGAGGAATG GCTGCCCGAG
CTGGCCCCAC CCTGGCTGCA GGGCCCCAAA GGCAAAGCCC TACTCGCCGG CTGGGGCCAG
GGGCTGGATG AGTTTGCCTC GCTTGCCGCA ACCGGCGTAC TGGCCCGCTG GGCCGCCCTG
GCGCCGGAAG ATGCCCTGAA TCGCCTGGGC GCCGAGCGCG GGCTTACGCG ATATCCGGGG
GAAAGCCTCG AGGCCTGGCG TACCCGAGTG CTGGGAGCCT GGGAGTTTTG GCAATGGGCG
GGCACCGAGT ATGGTATACA GCTCGCTCTG GCGCAGCTGG GCTACAACAG CGCGATCGTG
CCGGTGCGCA ACTACGACAA TAACCGGTGG AGCGAGTTTG ACGTGTACCT CTACGCTAGC
ACCCGCAGCT ATGACGGCTC CCAGGAAGAG AAAAGCCGCA TCCTGGGGAT TATCAACCAG
ATAAAACCGG CTCACACACG CATAGGCAGC GTGCGCTACG TGCCTAATGG CCCATTGAAC
TGGAACCCGG CGGGGCTGAA CTGGAACCCC GCCGGACAGG TTTGGGGGCA ACCCCCAATC
GTGTTGTACC CATAG
|
|---|
| Protein sequence | MPGSEIDLVP VRLYEEWLPE LAPPWLQGPK GKALLAGWGQ GLDEFASLAA TGVLARWAAL
APEDALNRLG AERGLTRYPG ESLEAWRTRV LGAWEFWQWA GTEYGIQLAL AQLGYNSAIV
PVRNYDNNRW SEFDVYLYAS TRSYDGSQEE KSRILGIINQ IKPAHTRIGS VRYVPNGPLN
WNPAGLNWNP AGQVWGQPPI VLYP
|
|---|
| |