| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mrub_1828 |
|---|
| Symbol | |
|---|
| ID | 8879936 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Meiothermus ruber DSM 1279 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013946 |
|---|
| Strand | + |
|---|
| Start bp | 1879403 |
|---|
| End bp | 1881364 |
|---|
| Gene Length | 1962 bp |
|---|
| Protein Length | 653 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | |
|---|
| Product | transketolase |
|---|
| Protein accession | YP_003507606 |
|---|
| Protein GI | 291296208 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.208586 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 0.379943 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCCAGA TACCCCCCAT TGCAAAAGCT TCCATTGATG CCATCCGCAT GCTGGCCCTG
GACGCGGTTG AGCAGGCCAA GTCCGGCCAC CCTGGGATGC CGATGGGCAT GGCCCCAGCG
GCGTATGTGC TGTGGACGGA GTTTCTGAAG CACAACCCCA AAGACCCCCA CTGGCCGGCT
CGAGACCGCT TTGTGCTCTC GGCGGGGCAT GGTTCGATGC TGCTCTATGC CCTGCTGCAC
CTGACCGGCT ACGACCTGTC CTTAGAGGAG CTCAAGCGCT TCCGCCAATG GGGTTCCAAG
ACCCCCGGGC ATCCCGAGTA CGGCCACACC CCCGGCGTCG AGGTGACCAC CGGGCCCCTG
GGGCAGGGTA TTTCGACTGC CGTCGGGATG GCCATTGCCG AGCGCAAGCT GGTGGCTGAG
TTTGGCGAAA TTGCCGAACA CTACACCTAC GTCATCGCCT CGGACGGCGA CCTGATGGAG
GGGGTGAGCG CCGAGGCCTC CTCGCTGGCC GGGCACCTGC GGCTGGGCAA GCTGATTGTG
CTCTACGACG ACAACGAGAT CTCCATTGAC GGCAGCACCG CGCTGGCTTT CACCGAAGAC
CGCCTGAAGC GCTACGAGGC CTACGGCTGG CACGTGGTGC CGGGGGTGCA CGGGGAAGAC
CTCGAGGCCA TCCGGGCCGC CCTGCGCGAA GCCCAGGCCG ACCCCCGCCC CAGCCTGATC
TCGGTGCGCT CGATCATCGG CTTTGGCTCG CCCCTGGCCG GCCACCACAA AGCCCACTCC
GACGCCATGG GGCCCGAGAA GGTGGCGGCC ACCCGGCAGG CCCTGGGCTG GCCGTATGCG
CCTTTTGAAA TCCCGGAGGA GGTGTACGCC CACTACCGGC AGGCCATCGC GCGGGGCCAG
CAAGCCCAGG CCGAGTGGCA GAGGAAATTT GAGGCTTTTG CCAAGTCCCA CCCCGAAAAA
GCCGCCGAGT TCCAGCGCCG CCTGGGCCGT GCGCTCCCCC TGGGCTGGGA AAGCCACCTC
CCCCGCTTTA GCGCCGGGGA GAAGCTAGCC ACCCGCGCGG CCTCGGGTAA GGTGCTGGAA
AAGCTGGTTC CGGTGCTGCC CGAGTTGATG GGCGGTTCCG CCGACCTCAC CCCCTCCAAC
AACACCCGCA CCCCCGATAT GACCGATTTT GGCCCCGAAA ACCCCGGCGG GCGGTACATC
CGCTACGGGG TGCGGGAGCA TGCCATGGGC GCGGCCATGA ACGGCATCGC CCTGAGCGGC
GCGCTGCGCC CGTATGGGGG TACTTTTCTG GTCTTTTCGG ACTACATGCG CCCGGCCATC
CGTATGGCGG CCCTGATGGG CACCCCCACG GTTTTTGTCT TCACCCACGA CTCGATAGCG
GTTGGGGAGG ACGGCCCCAC CCACCAGCCC ATCGAGCACC TCATGAGCCT GCGGGCCATC
CCCAACCTGT GGGTGGTACG CCCCGCCGAC GCCAACGAGA CCGCGGCGGC CTGGAAGCTG
GCCCTGGCGC GCACCGACGG CCCCACCGCC CTGATCCTGA CCCGCCAGGC GTTGCCGGTG
CTGGCGGGGG TGCGCCTCGA GGGGGTGGAG CGCGGGGGTT ACATCCTCTC CGAGGTGCCA
AACCCCCAGG CGGCCATTGT GGCGACCGGC TCGGAAGTGG CCCTGGCGCT GGAAGCCCAG
CAACTGCTGG CCGAAGAGGG GGTTGCGGTG CGGGTGGTCT CGCTGCCCTG CTGGGAGGCC
TTCGAGGCCC AGCCCGAGGA CTACCGCCAG GCCATCCTGC CCAAAAGCCT GCCCACCCTG
GCCCTCGAGG CCGGTACGAC GCTGGGCTGG GAACGCTACG CCCACAAAGC GGTGGGGCTC
GATCGCTTTG GCGCCAGCGC TCCTTATGCT GATGTGTACA GCAAGCTGGG CTTCACCAAA
GAGCGGGTGG CCGCCGAGGT GAAGTCCCTG TTGGGGGTTT GA
|
|---|
| Protein sequence | MTQIPPIAKA SIDAIRMLAL DAVEQAKSGH PGMPMGMAPA AYVLWTEFLK HNPKDPHWPA
RDRFVLSAGH GSMLLYALLH LTGYDLSLEE LKRFRQWGSK TPGHPEYGHT PGVEVTTGPL
GQGISTAVGM AIAERKLVAE FGEIAEHYTY VIASDGDLME GVSAEASSLA GHLRLGKLIV
LYDDNEISID GSTALAFTED RLKRYEAYGW HVVPGVHGED LEAIRAALRE AQADPRPSLI
SVRSIIGFGS PLAGHHKAHS DAMGPEKVAA TRQALGWPYA PFEIPEEVYA HYRQAIARGQ
QAQAEWQRKF EAFAKSHPEK AAEFQRRLGR ALPLGWESHL PRFSAGEKLA TRAASGKVLE
KLVPVLPELM GGSADLTPSN NTRTPDMTDF GPENPGGRYI RYGVREHAMG AAMNGIALSG
ALRPYGGTFL VFSDYMRPAI RMAALMGTPT VFVFTHDSIA VGEDGPTHQP IEHLMSLRAI
PNLWVVRPAD ANETAAAWKL ALARTDGPTA LILTRQALPV LAGVRLEGVE RGGYILSEVP
NPQAAIVATG SEVALALEAQ QLLAEEGVAV RVVSLPCWEA FEAQPEDYRQ AILPKSLPTL
ALEAGTTLGW ERYAHKAVGL DRFGASAPYA DVYSKLGFTK ERVAAEVKSL LGV
|
|---|
| |