Gene Mrub_1479 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMrub_1479 
Symbol 
ID8879580 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMeiothermus ruber DSM 1279 
KingdomBacteria 
Replicon accessionNC_013946 
Strand
Start bp1505717 
End bp1506781 
Gene Length1065 bp 
Protein Length354 aa 
Translation table11 
GC content55% 
IMG OID 
ProductAPE2256 family CRISPR-associated protein 
Protein accessionYP_003507261 
Protein GI291295863 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.394423 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCACCG TCATCCTCAC CACCGTAGGC ACCAGCCTGC TTACGAACGC TAAGAAAGCT 
ATCAAGGATA ATCCTACTGA TCAGGACATT CTGAACTACC TGCAGGCGGA TCCCAAAAAG
GCCTGTGCTG AGACCAACTC CCTTTCGCGC ATTTTGCAGG CTGGAGACGA GATCATCTTG
TTGTATAGTG CCACCGAGGA AGGCCGTAAG GCAGCGCATT TGCTGCAGCA ATATTTCCTG
CAAGCCAACG TACCCTGTGG ATTGGTTGAG ATAGGGGGCC TGGCTTACGA GGCAAAGGGC
TTTGTGGACT TTGGCCTGAA AAACTTCGTT CGCACCCTGG CCGGAGAGAT TCGCAAAGCA
GCCAAAAGAC AAAGGGAGGT TATCATCAAC GCCACAGGAG GCTTCAAGGC TGAAATCTCC
TACGCCACAG TTCTGGGGTT GGCCTTCAAG GTTCCAGTCT GCTACATTCA CGAACAGTTC
AAGGAAATTG CCATCCTCCC ACCTACACCC ATCGGCTGGG ATAGCAGCCT TTTTGTCTGG
TACGCCGATT TTTTCGATTG GCTGAGTGCG GGAGAAGCTG GGCTGCGGCC TAAAGTGGAG
GCAGAGTCCA GAGCCGCTTT GCTCCCCGAA GAGGCCCAGG TGCTTCTCGA GGAGTTTGAG
TTTGAGGGAC AGGTATACCT TGGCCTGTCG CCACTGGGCG AAGCTTACCT GGAAGCCTTC
AAGAATGAGC TCGAGCAAGC CCAGGGTGTG CCCATCTACC TTTACAGACT GGTCCGGCGA
GAACTTGAAA AGTTTGAACC CGCCACCCAG GAGCGCTACC ACAAGCTACT ACAGCGTCTG
CGCTTACCCA ACCGCGCAGC CCTCAGCGAA TTCAAAAGCG GCAGAGGCGA TGCCCTGGGC
TATCCCAAAG GCCAGGTGGA CGAGCGGCTT TTTTATGTCG AGAAAGACGG CAAGCTTTAT
GTGTTTGCCC TGACCCGCCA CGGCCCCGAG TACGACAAGA TGTGTCGGGA AGGCTTTTAC
TGGAGTAACT ATTCCGAAGA CGACTTTGAA CCCTGGGAAG GCTAG
 
Protein sequence
MSTVILTTVG TSLLTNAKKA IKDNPTDQDI LNYLQADPKK ACAETNSLSR ILQAGDEIIL 
LYSATEEGRK AAHLLQQYFL QANVPCGLVE IGGLAYEAKG FVDFGLKNFV RTLAGEIRKA
AKRQREVIIN ATGGFKAEIS YATVLGLAFK VPVCYIHEQF KEIAILPPTP IGWDSSLFVW
YADFFDWLSA GEAGLRPKVE AESRAALLPE EAQVLLEEFE FEGQVYLGLS PLGEAYLEAF
KNELEQAQGV PIYLYRLVRR ELEKFEPATQ ERYHKLLQRL RLPNRAALSE FKSGRGDALG
YPKGQVDERL FYVEKDGKLY VFALTRHGPE YDKMCREGFY WSNYSEDDFE PWEG