| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mrub_1400 |
|---|
| Symbol | |
|---|
| ID | 8879497 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Meiothermus ruber DSM 1279 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013946 |
|---|
| Strand | + |
|---|
| Start bp | 1436024 |
|---|
| End bp | 1437061 |
|---|
| Gene Length | 1038 bp |
|---|
| Protein Length | 345 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | |
|---|
| Product | Porphobilinogen synthase |
|---|
| Protein accession | YP_003507182 |
|---|
| Protein GI | 291295784 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 0.175511 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTCGATT TAGACAACCC CGAAGTGCAG TCCCTCGAGG CCCCGCCCGA CCTTGTGCGG
CGCCCGCGCC GTTTGCGCAC CAGCGCGGCC CTGCGCGAGA GCGTGGCCGA GACCCACCTG
CGCCCCACCG ACTTCCTGGC GCCGTTCTTC ATTACGACGG GTCGGGATCT GGCTGAACCC
ATCGCCACGC TGCCCGGCAT TCACCGCTAC AGCGTGGATA GGTTCTTGCT CGAGGTCGAG
CGCGCCCTCG AGCTGGGCCT GCGCAGCCTG CTGCTTTTTG GTGTGCTGCC CGATACCTGG
AAAGACCCCT TCGGTCAGAG CGCCGCCGAT CCCAACGGCC CGGTGCCCAC CGCCATCCGG
GAAGCCCGCA AGGCCTTTGG CGAGGATGTG GTCATCTACA CCGACGTCTG CCTGTGCGCC
CACACCACCC ACGGCCACTG CGGGGTGCTG AAAGAGACCC CTCGAGGGGT GCAGATCGAC
AACGACCGCT CGCTGCCGCA ACTGGCCGCC ATGGCCCTGG CCCACGCCGA GGCCGGCGCC
GATTTTGTAG CCCCCTCCGA CATGATGGAC GGGCGGGTGG GCTACCTGCG CCGTGCCCTG
GATCAGGCCG GCCATACTGG GGTGGGCATC CTCTCGTACG CCGTCAAGTA CGCCAGCGCT
TTTTACGGCC CATTCCGCGA TGCGGCCAAG AGCGCCCCCA GTTTTGGCGA CCGGGCCAGC
TACCAGATGG ACATCCGCAA CGCCCGCGAG GCCCTACGCG AAGCCGCCCT CGACGAGGCC
GAAGGGGCGG ATATGCTCAT GGTGAAGCCC GCGCTGGCCT ACCTCGATAT TCTGGCCCGC
CTGCGCCCGC AGACCCAACT GCCTTTGGTG GCCTACAACG TGAGCGGCGA GTACGCCATG
CTCAAGGCGG CGGCCCAGGC TGGGGTGCTG GACGAGGCCC GGGCGGTGCG CGAGACCCTG
GTGGCCATCA AGCGGGCCGG GGCCGACCTG ATCATCAGCT ACCACGCCCA GGAGGCCCTG
GCCCAGGGCT GGATCTGA
|
|---|
| Protein sequence | MLDLDNPEVQ SLEAPPDLVR RPRRLRTSAA LRESVAETHL RPTDFLAPFF ITTGRDLAEP
IATLPGIHRY SVDRFLLEVE RALELGLRSL LLFGVLPDTW KDPFGQSAAD PNGPVPTAIR
EARKAFGEDV VIYTDVCLCA HTTHGHCGVL KETPRGVQID NDRSLPQLAA MALAHAEAGA
DFVAPSDMMD GRVGYLRRAL DQAGHTGVGI LSYAVKYASA FYGPFRDAAK SAPSFGDRAS
YQMDIRNARE ALREAALDEA EGADMLMVKP ALAYLDILAR LRPQTQLPLV AYNVSGEYAM
LKAAAQAGVL DEARAVRETL VAIKRAGADL IISYHAQEAL AQGWI
|
|---|
| |