| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mrub_1378 |
|---|
| Symbol | |
|---|
| ID | 8879475 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Meiothermus ruber DSM 1279 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013946 |
|---|
| Strand | - |
|---|
| Start bp | 1411746 |
|---|
| End bp | 1414145 |
|---|
| Gene Length | 2400 bp |
|---|
| Protein Length | 799 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | |
|---|
| Product | carbon-monoxide dehydrogenase large subunit |
|---|
| Protein accession | YP_003507160 |
|---|
| Protein GI | 291295762 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.217802 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 0.552403 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCAGTCC AGACCCCCAA CCTCGAGCCC AAGGGCATCC AAGGGCTCGG TAAGGCCATC
AAGCGCAAGG AAGACGCTCG CTTTATCGTG GGCAAAGGCA ACTACCTCGA CGATATCAAC
CTTCCAGGCA TGCTCTACAT GGCCCTGGTG CATAGCCCCT ACGCCCACGC TAAAATTTTG
AACATCGATA CCAGCGAGGC CCTGAAAATT CCCGGCGTCA AAGCCGTCAT CACCGCCAAA
GACCTGGCCG CCGCGGGGCT TTCCTGGATT CCAACCCTGG CCGGCGATAA GCAGATGGTG
CTGGCCGACG GCAAGGTGCT GTACCAGCAC CAGGAGGTGG CCGCGGTGTA CGCCGAGACC
CGGCAGGCCG CCGCCGACGG GGCCGCCGCA GTCCAGGTCG AGTACGAGCC CCTGCCAGTG
GTGGTCGATC CCTACAAGGC CACCGCCCCC GACGCGCCGG TGCTGCGGGA AGACATCAAA
GATCAGATGA GCGGGGCCCA CGGGCCTCGG CGGCATCCCA ACCACATCTG GACCTGGGAG
GTGGGCTCTA AGGACGAAAC CGAAAAGGCC CTGGCCCAGT CCGAGGTGCG CATCAAGCAG
CACATGGTCT ACCCGCGCAG CCACCCGGCC CCCCTGGAGC CCTGCGGCTG CATCGGCGAC
ATGAACAAGG CCACCGGACG CCTTACGGTC TACATGACCA CCCAGGCGCC CCACGCCATC
CGCACCGTGC TATCACTGGT AACCAAAATT CCCGAGAACA ACATCCGGGT TATCTCGCCC
GATATTGGCG GTGGCTTCGG CAACAAGGTG CCGGTCTACC CCGGCTACGT GTGCGCCATC
GTGGGCAGCA TCGTGCTGGG CGCGCCGGTC AAATGGGTCG AGACCCGCAC CGAGAACCTC
ACCACCACCG GCTTCGCCCG CGATTTCCAC ATGGACATCG AGATTGGGGC CACCAAAGAC
GGCAAGGTCA CGGCCATGAA GGTCTACACC CTGGCCGACC ACGGGGCCTT CGACGCCGCC
GCCGACCCCA GCAAGTACCC GGCGGGTTTG TTCAGCATCT GCACCGGATC CTACGACTTC
CAGAAAGCCT ACGCCCAGGT AGAAGCGGTT TACACCAACA AGGCCCCCGG CGGGGTGGCC
TACCGCTGCT CCTTCCGCGT GACCGAGGCC AGCTACCTGA TTGAGCGCAG CATGGACGTG
CTGGCCCACG AGCTCAAGAT GGACCCCGCC GAGCTGCGCC TCAAGAACTT CATCCAGCCC
CACCAGTTCC CCTACCCCTC GGCCCTGGGC TGGACCTACG ACTCCGGCGA CTACGAGAAA
ACCCTGAAGG TGGCGCTCGA GCGCATCGGT TACCACGAGC TGCGCAAAGA GCAAGCCGAG
AAGCGGGCCA GGGGCGAGCT AATGGGCATT GGCATCTCCA CCTTTACCGA GATTGTGGGG
GCCGGGCCCA GCAAGGACTT CGACATCCTG GGCATCAAGA TGTTCGATGG GGCCGAGATT
CGGGTACACC CCACGGGCTC CGCCATCGTG CGGGCCGGCA CGCGCCACCA GGGCCAGGGC
CACGAGACCA CCTGGGCCCA GATCGTCTCG GAGGAGCTGG GCCTGGACGT GGACAAGATT
ATTGTGGAGG AGGGCGACAC CGACACCGCC CCCTATGGCC TGGGCACCTA CGCCAGCCGC
AGCACCCCCA CCGCCGGCGG GGCCATGGCC CTGGCCGCCC GTCGCATCCG CGAGAAGGCC
AAAAAGATCG CCGCACACCT GCTGGAAGTG GGTGAAAACG ACGTGGAGTG GGTGGACAAG
AAGTTCCAGG TCAAGGGCGT GCCCAGCAAG AGCGTGACCA TGAACGAGGT GGCTTTTGCC
GCCTATACCA ACCTGCCCCC GGGCCTGGAG CCTGGACTGG AAACCACCTA CTACTACGAC
CCGCCCAACC TGACCTTCCC CCACGGCGCC TACGTCTGCG TGGTGGACAT TGACAAAGGC
ACCGGCGAGG TCAAGGTGCG CCGCTTCGTA GCCATTGACG ACTGCGGCAC CATCATCAAC
CCCATGATTG TGGAAGGACA GGTGCACGGC GGCCTGACCG AAGGCTTCGC CATGGCCTTC
ATGCAGGAGA TCGCCTTCGA CGAGCAGGGC AACCACCTGG CCTCCAACTT CACCGATTAT
CTGCTGCCCA CCGCCCTCGA GACCCCCAAA TGGGAGACCG GCCACACCGT TACCCCCAGC
CCCCACCACC CCATTGGGGC CAAAGGGGTG GGCGAGTCGC CCACGGTGGG CAGCCCGGCC
GCCTTTGTGA ACGCCGTGGT GGACGCCCTG GCTCACCTGG GTGTGCGCCA CATCGACATG
CCCATCACCC GCGAAAAGGT CTGGAAGATT TTGCGGCAGG CCGGAGTGGA CGCTTTCTAG
|
|---|
| Protein sequence | MAVQTPNLEP KGIQGLGKAI KRKEDARFIV GKGNYLDDIN LPGMLYMALV HSPYAHAKIL
NIDTSEALKI PGVKAVITAK DLAAAGLSWI PTLAGDKQMV LADGKVLYQH QEVAAVYAET
RQAAADGAAA VQVEYEPLPV VVDPYKATAP DAPVLREDIK DQMSGAHGPR RHPNHIWTWE
VGSKDETEKA LAQSEVRIKQ HMVYPRSHPA PLEPCGCIGD MNKATGRLTV YMTTQAPHAI
RTVLSLVTKI PENNIRVISP DIGGGFGNKV PVYPGYVCAI VGSIVLGAPV KWVETRTENL
TTTGFARDFH MDIEIGATKD GKVTAMKVYT LADHGAFDAA ADPSKYPAGL FSICTGSYDF
QKAYAQVEAV YTNKAPGGVA YRCSFRVTEA SYLIERSMDV LAHELKMDPA ELRLKNFIQP
HQFPYPSALG WTYDSGDYEK TLKVALERIG YHELRKEQAE KRARGELMGI GISTFTEIVG
AGPSKDFDIL GIKMFDGAEI RVHPTGSAIV RAGTRHQGQG HETTWAQIVS EELGLDVDKI
IVEEGDTDTA PYGLGTYASR STPTAGGAMA LAARRIREKA KKIAAHLLEV GENDVEWVDK
KFQVKGVPSK SVTMNEVAFA AYTNLPPGLE PGLETTYYYD PPNLTFPHGA YVCVVDIDKG
TGEVKVRRFV AIDDCGTIIN PMIVEGQVHG GLTEGFAMAF MQEIAFDEQG NHLASNFTDY
LLPTALETPK WETGHTVTPS PHHPIGAKGV GESPTVGSPA AFVNAVVDAL AHLGVRHIDM
PITREKVWKI LRQAGVDAF
|
|---|
| |