Gene Mrub_1349 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMrub_1349 
Symbol 
ID8879445 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMeiothermus ruber DSM 1279 
KingdomBacteria 
Replicon accessionNC_013946 
Strand
Start bp1381292 
End bp1381978 
Gene Length687 bp 
Protein Length228 aa 
Translation table11 
GC content63% 
IMG OID 
Productribose 5-phosphate isomerase 
Protein accessionYP_003507131 
Protein GI291295733 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.047418 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.22683 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGACC AAGAGAACTT CAAACAGCAA GCGGCCCTCG AGGCCGTCAA GTTCGTGCGT 
TCGGGGATGG TGGTGGGGCT TGGTACGGGC TCCACCGCCC GGTATGCGGT TTTGGAGCTA
GGCCGCCGGT TGCGCGAGGG CGAGCTTTCG GATGTGGTGG CGGTGCCTAC TTCGGAGGCC
ACGGCCCGGC TGGCCCAGAG CCAGGGGATT CCTCTGGTGG AGCTCGAGGC CCGGGGTGTT
GACCTGGCTA TTGATGGCGC CGACGAAATC GCCCCCGATC TCTCCCTCAT CAAGGGGTTG
GGCGGGGCCC TGCTGCGCGA GAAAATTGTC GAGGCCAACG CCAGGCAGTT CATCGTGATC
GCCGACCATA GCAAAAAGGT GGGCCAACTG GGGCGGGGGG TGGTTCCGGT GGAGATTGTG
CGCTTTGGCT ACCGTGCCAC CCTGCAGGCC TTGGGGCGAA TGGGGAAGGC CACCTTGCGC
ATGAACGGAG AAGAATTCTT CTATAGCGAC GGAGGCAACC TAATCGCAGA TATCGACTTC
GGGCCAATTC CGAAGCCTGG AGACCTCGAG GTCGAACTCA AGCGCATTCC CGGCGTGGTG
GAGAGCGGCT TATTCATCGG GCTGGCTACG CTGGCAATCG TGGCCGGGCC AGAGGGCCTG
GAGTACCTGG GCACCCCACC CCAGTAG
 
Protein sequence
MNDQENFKQQ AALEAVKFVR SGMVVGLGTG STARYAVLEL GRRLREGELS DVVAVPTSEA 
TARLAQSQGI PLVELEARGV DLAIDGADEI APDLSLIKGL GGALLREKIV EANARQFIVI
ADHSKKVGQL GRGVVPVEIV RFGYRATLQA LGRMGKATLR MNGEEFFYSD GGNLIADIDF
GPIPKPGDLE VELKRIPGVV ESGLFIGLAT LAIVAGPEGL EYLGTPPQ