| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mrub_1114 |
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| Symbol | |
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| ID | 8879204 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Meiothermus ruber DSM 1279 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013946 |
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| Strand | + |
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| Start bp | 1120146 |
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| End bp | 1121888 |
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| Gene Length | 1743 bp |
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| Protein Length | 580 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | |
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| Product | alpha amylase catalytic subunit |
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| Protein accession | YP_003506898 |
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| Protein GI | 291295500 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0144434 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.666267 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGACACT ACCACGACTG GGAGCCTTTT TGCGTAGACC CCCTGAAGCC CGAGCTGGGG
CAGGAAATCA CCCTGCGCCT GCGCACCCCG GCCCGGGCTG GTTTTCTGAT CCTCGAGCGC
TACGGCGAGG TGGAGCGGCG GCCCATGAAA GCCGTGCCGG GCGGGCTGGA AATCAGGCTC
CCGCTTCACA CCTCCCCTTT GCGGTACTGC TTTTTTCTGA CCGAGGAAAA GGCCTACCTC
GCAGCAGATG GGCTACAGGG CCCCATGCCC CGCTACGACA AGTTTTTTCA CCTGCTGGCC
CAGCCCACCG TGCCCGACTG GGCGGTGGGG GCGGTGTTTT ATCAGATCTT TCCCGACCGC
TTTCGCAACG GCAACCCCCA CAACGACCCC CAGAGCGGTG AATGGGTGTA TATGGGCCGG
CCCATCGTGC GCAAAGAGTG GGACGAACCC GTGAGCTACG GGCCCGGCGA GGGGCCTATC
CAGCACTATG GGGGCGACCT CGAGGGCATT CTGGAGAAGC TCGACTACCT CGAGGCGCTG
GGCATCGAGG CCCTCTACCT CAACCCCATC CTGCCCTCGG GCTCCAACCA CCGCTACGAC
GCCAGCGACT ACCACAACGT AGACCCCCAC CTGGGGGGCA ACCCGGCCTT CGAAAAGCTG
GTCGAGGCCC TGCACCAGCG CGGTATGAAG CTGGTACTGG ACGGGGTTTT CAATCACATT
GGCAACACCC ACCCCGACTT CCAGAAAGCC CTGCAAGACC CCACCTCCCC CGAGGCCGGG
CAGTTTACTT TTTACGCCGA CGGCTCGTAC GCCGCCTTCT ACGGGGTCAA AACCCTGCCC
AAGCTGGACT ACGCCAACCC CCTCACAGTG GAGCGCTGGA TTGACGGCTA CCACGCCCCG
GTGCGGCACT GGATTCGCAA GGGGGCCGAT GGCTGGCGGC TGGATGTGGC CCACCAGATG
GGCGAAGGGG GCACCGACCG GCGCAATGCG GAAATCCTGC GCCTGATCAA ACACAACAGC
ATGGAGGAAA ACCCCGAGGC CTTGGTGTTT GGCGAGCTGT TCTTCGACAC CCTGCCCACC
CTGCGGGCCC ACACCCTGGA TGGCTCCATG CACTACGCCG GGTTTGCCAA CCCGGTGATG
GAGTGGTTAT CGGGCAAAAA CGTGTACGGC TGGGAGGTGG CGGTCTCGAG CCAGGCGGCG
TGGGATACCC TGTGGGACCA TTACACCGCC CTGCCGCTGC AACTCCGCCA GAGCATGTAC
ACCCTGATTA GCAGCCACGA TATTCCCAGG GCCCTGTGGC GGCTCTCGGG GGATGTGCAG
CGCTTCAAGC TGGCGTTGGG GCTTCTCTTT ACCTTTCCCG GCGCGCCGGG CCTCTACTAC
GGCGACGAGA TCGGGCTCGA CCAGGCCAAC CCCTACCACG ACTGGAACGG CGACCCCATG
TGCCGGGGGA CGTTTCCCTG GGATGAGCGC CGCTGGAACC ACGAGGTGCT GGCCTGGGTC
AAAACCCTCA TCCGGCTCAA AAAGAGCGTA CCGGCCCTGC GGCGGGGGGG CTTGCTGCCC
TTGCAGGTTA CGGAGCAGTG CCTGGCCTTC AGGCGCATGT ATCAGGGTGA GGAGGTCTGG
GTTTACGCGG CCTTGGAGCC CCTCGAGGTC GTACTGCCCA GGGTGGAAAA CCTGCTAACC
GGCCAGACCC AGACCGGCCG GGTTCGCCTT TCGGGCCTGG GGGTGTTTCG CCTGTTGCAA
TAG
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| Protein sequence | MRHYHDWEPF CVDPLKPELG QEITLRLRTP ARAGFLILER YGEVERRPMK AVPGGLEIRL
PLHTSPLRYC FFLTEEKAYL AADGLQGPMP RYDKFFHLLA QPTVPDWAVG AVFYQIFPDR
FRNGNPHNDP QSGEWVYMGR PIVRKEWDEP VSYGPGEGPI QHYGGDLEGI LEKLDYLEAL
GIEALYLNPI LPSGSNHRYD ASDYHNVDPH LGGNPAFEKL VEALHQRGMK LVLDGVFNHI
GNTHPDFQKA LQDPTSPEAG QFTFYADGSY AAFYGVKTLP KLDYANPLTV ERWIDGYHAP
VRHWIRKGAD GWRLDVAHQM GEGGTDRRNA EILRLIKHNS MEENPEALVF GELFFDTLPT
LRAHTLDGSM HYAGFANPVM EWLSGKNVYG WEVAVSSQAA WDTLWDHYTA LPLQLRQSMY
TLISSHDIPR ALWRLSGDVQ RFKLALGLLF TFPGAPGLYY GDEIGLDQAN PYHDWNGDPM
CRGTFPWDER RWNHEVLAWV KTLIRLKKSV PALRRGGLLP LQVTEQCLAF RRMYQGEEVW
VYAALEPLEV VLPRVENLLT GQTQTGRVRL SGLGVFRLLQ
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