| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mrub_1055 |
|---|
| Symbol | |
|---|
| ID | 8879144 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Meiothermus ruber DSM 1279 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013946 |
|---|
| Strand | + |
|---|
| Start bp | 1055484 |
|---|
| End bp | 1058225 |
|---|
| Gene Length | 2742 bp |
|---|
| Protein Length | 913 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003506839 |
|---|
| Protein GI | 291295441 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 31 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGATAG GTCGTATTAA ACCAATAGGG CTGAGACCCG CTGGGAATGC ACTTGTCATC
ACAGTCTTGG TGGCTCTGAT TATGGTTATT TCGCTGCTTT CCATTACCAC CAGCCTGACC
GTGAGCAACC GCCAAGTGGC AACCAACCAG GGGCTGGCTA ACCGCGCACA GTTTGCCGCC
GAGTCTGGGT TGCTTAGGGG GCTACAGAGC TACCAGATGG CCCTTAATTA CCTGAAAGGA
ATCAGGGTAG ATCTGTCCGG GGGCAACGCG GCGGCTGTGC GCGCGGCTTA TGTGCAAGCG
CTGTATCGCT TCTGCTATGG CAACAGCACC GCTGGGCCCT CCTTGAGCGC TTTCGAGAAC
ACCCTAAATA CCATGCAGAC CGGCACCTTG TGCGAGGCTT TACCCATAGA CCCCACCCTT
TCCCCGGCTG AGGTCGGCAA CGAGCGCCTG GCCATCCTCA TCAATCCCTT GCTATTCGAC
AACACTGTTT ACAACGGCCA GGTGAGCAAC CCAGCAGAGT ACTGGGGCCG CCTGGCCCTG
GGCATGGGGG GCTCGGAGGG TGTGCTGGGT TCGTCAGATG GCCTGGAAGA CCGTTACGTG
GTGCAGGTCG ATTTTACGCC GCGCCGTATT CTCATCCAAA ATAGCGCGCC AGTGCTGGTG
TTTGGTGATC CCAACAATGC CATTATCGCT ACGGGCCGTG TCGTGCAGGG GACCACAGTG
CTGGCCGAAC GCCGGGTGGC TCGAGGTGTG TCCACGGCCG GCAGCCTGGG GGTTACCAGC
GTCACCATCC AGAACCCCAG CTTCTCCTAC TTCGCTTTTT TCGTAAACAA CACCGTGCGT
TCCAATGGTA GCCGGGTGGT GCTGCGCGAT GGCTTTACCG TGAATGGCCC TGCTTTTACC
AATGGTCGTT GGGCCTTTGA GCAGCGCGTA CCCGCGGCTA CCTTCAACTT TGGCGGGCAG
TTTGGCAGCG CGGGTTGTGA ACAGGGCGCC GAGAGCTGTA CCGAAGCCCA ACGCCTGGCC
GGTAAAGGCT ACTACCTGGG GGACGGGAAC ACCACCAGCA CGTTTGCAAC CGTCCCGGAA
AACGACTCAG CCACCGGGCT GGCTGGGATT AATCCCAGTT TTGCCCGCCT GCGGAACCCT
GCGGGGAACT TTTTGTGCCG CGACGAAAAC GGGGGGCAGG TGGTCTGTGC TGACGATGCC
CCGGCCAGCA CCTGGCTGTA CGATGTGAAC TGGCAACGTA ACCCAATTCC TATGCCGGGC
CGCGATGCCA TTGCACGCTT TGAGCAGAAC GCGGCCGGTG GCACCCCTAC CACCAGCAGA
GACGATAACG GCAACCTGCT TCGCGATGCC AACGGACGGA TTGTGGTAAG CAACCCTACC
GATACCGCTG GGTTCTTTAT CGACAGCAGT CTGTTCACGG CCTCAACCAG CAACCAGGCT
TCTAGCGGCT GGAGAAATGT TTCAGGTGGT ACGGTGGTGA TCAACCCGGC GACGGTTCCC
CAGCCGAGTG CCAGCGTGCT GCAAAACAAC ACCGGCCGCT ATGTGGGAAC GCCAACCGTT
CGCGTGTACG TAGAAAATGG CCGTCAGCGC ATCAGTGTGA CGGCTACCTA CGTCACTGGA
TACGCCCTGG CGGTGCAACA AGAATGCTAC ACGCCCCCTC CTCCCGGTGG TGGTGGCGGC
GGCGGTGGTG GCGGCGGCGG CGGTGGCGGC GGCGGCGGTG GCGGTGGCGG CGGCGGCGGC
GGCGGGGTAT GGCTGCCTGA GCTGCAAAAA CTGGCCGACT ACCTTTTCAA CTTGGGCTCC
ATGGCCCACG CCCAGAGCTT CACCATCACC ATCACCTGCT CCCGTGGTGG AACGCCGCGC
TACCGCACCT ACTGGACCAA CAACCCGAAC GACCCTAATA TCATCCAGAA CCCCAGGCCC
ACCCTACGCC AGACCATTAC TGTGGTCTAC GAGGTGGATG AGCAGGGCCA GGTTAGCAAG
ATAGCCGATA ACAGCGCAGG TGTTCAGACC CTTCCCAGCG GCGGCCTTAT CTTGAGCAAC
AGTGCGGTGC CCAGGTCGGC CATTCCTCCC ATCCAGGGGC CGCCCCCGGG GGGACGCTTC
AACGGTGTGA TTTACAGCAG TGGTAACCTG GCCGTGCGTA GCGTAAGCGA TGTTAATAAC
GCCAGCGAGG CCAGCAACAT CCGGGCTGTG GCCAGCTACC AGCAGCTATC CATTGCTGCA
AGAAACCACA TCCTGATTCA GTCAAACCTG CGCTACCAGA GCCCTATCCC CGATCCCCTG
CCGGCTGACC CTGGCCAGTG GCCGCGCAAC CTCCTGGGTT TGTATGCGGG TCAGGACGTG
CGGCTTGATC CTCAAGGCTA TCTATCTATT ACCAGCAACA GCAACCGCAA CTTGCTGGTA
GACGGCGTGG TCATGGCCCA GAATGGGGAG GTGCGGGGGC ATAATTCCGC CTTCGATGCT
TGTGCCAATG CCGCTGATTT GCGGGATGGC GGTAGTTTTC GGGTGTTTGG GGGTGTGATC
CAGAATCGCT TGGGAGCCAT TAACTGTGGA ACGGTGGGTG GGGTCTTCCG CGGGTATCGT
TCCAACCACA CCTACGACCG GCGGCTGCTT GATCCGGCCT ACCGACCGCC CAGCTTCCCG
GAGGTGAGCA ATGCCACCCT CAACACAACG GTTAACACGG TTTTGCAAGG CAATGCGGGC
TCGGCAGGTA GCCAAGGCTT TTGGCGCTTA ATTGGTCAGT AG
|
|---|
| Protein sequence | MKIGRIKPIG LRPAGNALVI TVLVALIMVI SLLSITTSLT VSNRQVATNQ GLANRAQFAA
ESGLLRGLQS YQMALNYLKG IRVDLSGGNA AAVRAAYVQA LYRFCYGNST AGPSLSAFEN
TLNTMQTGTL CEALPIDPTL SPAEVGNERL AILINPLLFD NTVYNGQVSN PAEYWGRLAL
GMGGSEGVLG SSDGLEDRYV VQVDFTPRRI LIQNSAPVLV FGDPNNAIIA TGRVVQGTTV
LAERRVARGV STAGSLGVTS VTIQNPSFSY FAFFVNNTVR SNGSRVVLRD GFTVNGPAFT
NGRWAFEQRV PAATFNFGGQ FGSAGCEQGA ESCTEAQRLA GKGYYLGDGN TTSTFATVPE
NDSATGLAGI NPSFARLRNP AGNFLCRDEN GGQVVCADDA PASTWLYDVN WQRNPIPMPG
RDAIARFEQN AAGGTPTTSR DDNGNLLRDA NGRIVVSNPT DTAGFFIDSS LFTASTSNQA
SSGWRNVSGG TVVINPATVP QPSASVLQNN TGRYVGTPTV RVYVENGRQR ISVTATYVTG
YALAVQQECY TPPPPGGGGG GGGGGGGGGG GGGGGGGGGG GGVWLPELQK LADYLFNLGS
MAHAQSFTIT ITCSRGGTPR YRTYWTNNPN DPNIIQNPRP TLRQTITVVY EVDEQGQVSK
IADNSAGVQT LPSGGLILSN SAVPRSAIPP IQGPPPGGRF NGVIYSSGNL AVRSVSDVNN
ASEASNIRAV ASYQQLSIAA RNHILIQSNL RYQSPIPDPL PADPGQWPRN LLGLYAGQDV
RLDPQGYLSI TSNSNRNLLV DGVVMAQNGE VRGHNSAFDA CANAADLRDG GSFRVFGGVI
QNRLGAINCG TVGGVFRGYR SNHTYDRRLL DPAYRPPSFP EVSNATLNTT VNTVLQGNAG
SAGSQGFWRL IGQ
|
|---|
| |